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IVF0005525 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005525
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationchr08:13269858..13270133
RNA-Seq ExpressionIVF0005525
SyntenyIVF0005525
Gene Ontology termsGO:0030246 - carbohydrate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY17410.1 Uncharacterized protein TCM_036575 [Theobroma cacao]5.71e-0863.83Show/hide
Query:  GKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        G GGGGGG G MVAPG+ GA +ISRD+FESN++GYF    ++EKG K
Subjt:  GKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
XP_007020185.2 PREDICTED: glycine-rich protein DOT1 [Theobroma cacao]5.44e-0863.83Show/hide
Query:  GKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        G GGGGGG G MVAPG+ GA +ISRD+FESN++GYF    ++EKG K
Subjt:  GKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
XP_008465297.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]3.57e-36100Show/hide
Query:  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
Subjt:  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
XP_021734048.1 glycine-rich cell wall structural protein 1.0 [Chenopodium quinoa]1.72e-0870.79Show/hide
Query:  GGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        GGGK GGGGGGG    G GGGGGGGG   GGGGKGGSGGGS  KGGGG G G MVAPG+GG+ +ISR AFESN  GYF  F+A EKG K
Subjt:  GGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
XP_038900902.1 uncharacterized protein LOC120087950 [Benincasa hispida]5.08e-1275Show/hide
Query:  GHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        G GTMVAPG+GGA HISR+ FESN+RGYFQD  A++KGGK
Subjt:  GHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
TrEMBL top hitse value%identityAlignment
A0A1S3CQ14 glycine-rich cell wall structural protein 1.0-like3.8e-26100Show/hide
Query:  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
        MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
Subjt:  MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGCGGAGGAAAGAGTGGAGGAGGAGGCGGTGGTGGAAGTAAAGCCGCAGGAGTTGGTGGTGGCGGTGGCGGTGGCGGTAGCGGTAGCGGTGGAGGTGGCAAAGG
TGGTAGCGGTGGAGGAAGTTGTGGAAAAGGAGGTGGTGGTGGTGGTCATGGAACTATGGTCGCTCCGGGAACTGGCGGAGCCGTACATATCTCACGTGATGCATTTGAGA
GCAATTCAAGAGGTTACTTTCAAGATTTTCGTGCAGCTGAGAAGGGCGGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGCGGAGGAAAGAGTGGAGGAGGAGGCGGTGGTGGAAGTAAAGCCGCAGGAGTTGGTGGTGGCGGTGGCGGTGGCGGTAGCGGTAGCGGTGGAGGTGGCAAAGG
TGGTAGCGGTGGAGGAAGTTGTGGAAAAGGAGGTGGTGGTGGTGGTCATGGAACTATGGTCGCTCCGGGAACTGGCGGAGCCGTACATATCTCACGTGATGCATTTGAGA
GCAATTCAAGAGGTTACTTTCAAGATTTTCGTGCAGCTGAGAAGGGCGGGAAGTAG
Protein sequenceShow/hide protein sequence
MAGGGKSGGGGGGGSKAAGVGGGGGGGGSGSGGGGKGGSGGGSCGKGGGGGGHGTMVAPGTGGAVHISRDAFESNSRGYFQDFRAAEKGGK