; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005534 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005534
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhytochromobilin:ferredoxin oxidoreductase
Genome locationchr05:16488168..16488410
RNA-Seq ExpressionIVF0005534
SyntenyIVF0005534
Gene Ontology termsGO:0010019 - chloroplast-nucleus signaling pathway (biological process)
GO:0010024 - phytochromobilin biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0050619 - phytochromobilin:ferredoxin oxidoreductase activity (molecular function)
GO:0050897 - cobalt ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049985.1 phytochromobilin:ferredoxin oxidoreductase [Cucumis melo var. makuwa]7.05e-35100Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
        MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD

KAA0067231.1 phytochromobilin:ferredoxin oxidoreductase [Cucumis melo var. makuwa]1.72e-2888.68Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
        +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERGVTCTLD
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD

KAG6590181.1 Phytochromobilin:ferredoxin oxidoreductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.07e-2180.85Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL SKRFL+YFPE+ CE GT+NTKRSMAGKSYEHRPWD+RG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

XP_008450371.1 PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo]7.66e-2287.23Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

XP_023515585.1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucurbita pepo subsp. pepo]8.07e-2180.85Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL SKRFL+YFPE+ CE GT+NTKRSMAGKSYEHRPWD+RG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

TrEMBL top hitse value%identityAlignment
A0A0A0LXG3 Uncharacterized protein1.7e-1580.85Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +F+G+DEL SK+FL+YFPE+ CE GTINTKRSMAGKSYEHRPWDERG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

A0A1S3BP29 phytochromobilin:ferredoxin oxidoreductase, chloroplastic9.2e-1787.23Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

A0A5A7VNP0 Phytochromobilin:ferredoxin oxidoreductase8.0e-2188.68Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
        +FNGIDEL SK FL+YFPE+RCE GTINTKRSMAGKSYEHRPWDERGVTCTLD
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD

A0A5D3C8Z0 Phytochromobilin:ferredoxin oxidoreductase1.2e-24100Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
        MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD

A0A6J1HBM1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic6.0e-1680.85Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL SKRFL+YFPE+ CE GT+NTKRSMAGKSYEHRPWD+RG
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

SwissProt top hitse value%identityAlignment
Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplastic8.6e-1259.57Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

Arabidopsis top hitse value%identityAlignment
AT3G09150.1 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)6.1e-1359.57Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)6.1e-1359.57Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG

AT3G09150.3 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)6.1e-1359.57Show/hide
Query:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG
        +FNG+DEL +K F++YFPE++ E GT++ KRS+ GKSYE RPWD  G
Subjt:  MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTC
TTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATGGCATCGACGAGCTCGAAAGCAAAAGGTTTCTGAATTACTTTCCAGAGTTTCGCTGTGAACATGGTACAATCAACACGAAACGTAGTATGGCAGGAAAGTC
TTACGAACATCGACCTTGGGATGAAAGAGGTGTAACTTGTACGTTAGACTAA
Protein sequenceShow/hide protein sequence
MFNGIDELESKRFLNYFPEFRCEHGTINTKRSMAGKSYEHRPWDERGVTCTLD