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IVF0005537 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005537
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionVoltage-dependent T-type calcium channel subunit alpha-1I (Ca(V)3.3) like
Genome locationchr11:25021106..25021333
RNA-Seq ExpressionIVF0005537
SyntenyIVF0005537
Gene Ontology termsGO:0045490 - pectin catabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647058.1 hypothetical protein Csa_023003, partial [Cucumis sativus]3.13e-3595.38Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGD
        MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLR LHGSSI G D
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGD

KAG6570773.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]1.36e-2891.38Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHG
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHG

KAG7010620.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]6.61e-3077.33Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG        GR  P V N
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN

VVA31225.1 Hypothetical predicted protein [Prunus dulcis]3.62e-1664.15Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ERT+RRLRA+HG  +R
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]3.65e-2977.33Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN
        ME ETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRER+KRRLR LHG        GR  P V N
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN

TrEMBL top hitse value%identityAlignment
A0A0A0KC65 Uncharacterized protein4.6e-3093.33Show/hide
Query:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN
        MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLR LHGSSI G D  RQLPAVVN
Subjt:  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN

A0A5E4FUM3 Uncharacterized protein6.3e-1164.15Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  DP ERT+RRLRA+HG  +R
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR

A0A6J5V5Y0 Uncharacterized protein1.8e-1064.15Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR
        +LG+LGR CYAVLCLGV+LL V + +YVG  E  DP ERT+RRLRA+HG   R
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR

A0A6J5XGV1 Uncharacterized protein1.8e-1064.15Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR
        +LG+LGR CYAVLCLGV+LL V + +YVG  E  DP ERT+RRLRA+HG   R
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIR

A0A7N2KN99 Uncharacterized protein7.4e-1272.55Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSS
        +LG+L RHCYAVLCLGVLLL+V + HYV   EP+DPRERT RRLRA HG S
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGAGACTGCGCTGGCGGCGATTCTCGGAAGATTGGGGCGTCATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCTTCTCACGGTGGCTGTAGTTCACTACGT
TGGCGACGGGGAGCCGACCGATCCACGCGAGCGGACCAAGCGCCGTCTTCGGGCCTTGCACGGCTCATCAATTCGCGGCGGAGATGGCGGCCGTCAGTTGCCTGCGGTGG
TGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGAGACTGCGCTGGCGGCGATTCTCGGAAGATTGGGGCGTCATTGCTATGCGGTTTTGTGTTTGGGAGTTCTTCTTCTCACGGTGGCTGTAGTTCACTACGT
TGGCGACGGGGAGCCGACCGATCCACGCGAGCGGACCAAGCGCCGTCTTCGGGCCTTGCACGGCTCATCAATTCGCGGCGGAGATGGCGGCCGTCAGTTGCCTGCGGTGG
TGAATTGA
Protein sequenceShow/hide protein sequence
MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRALHGSSIRGGDGGRQLPAVVN