; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30A
Genome locationchr02:7521886..7525572
RNA-Seq ExpressionIVF0005549
SyntenyIVF0005549
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139072.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis sativus]9.27e-17693.75Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRS+SPRDRPDSR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        ERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   RSPSPVRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSE NGDRSP Q
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

XP_008450302.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis melo]6.96e-19098.26Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGS----GRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERGS    GRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGS----GRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR

Query:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSE NGDRSPGQ
Subjt:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

XP_008450303.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Cucumis melo]3.11e-19299.65Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSE NGDRSPGQ
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

XP_038879567.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Benincasa hispida]7.42e-16991.38Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGS----GRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERGS    GR HDRRRSP RYSRSPRYSRSPAQR  RYSRSP PRHAR+RSRSYDYASPPPKQ+AYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGS----GRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR

Query:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        PDSRERSFPRQ+SRGR  SRSPRLDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRSRSP+ SPRHEE YRSE NGDRSP Q
Subjt:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

XP_038879568.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Benincasa hispida]3.33e-17192.66Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGR HDRRRSP RYSRSPRYSRSPAQR  RYSRSP PRHAR+RSRSYDYASPPPKQ+AYSRSVSPRDRPDSR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        ERSFPRQ+SRGR  SRSPRLDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRSRSP+ SPRHEE YRSE NGDRSP Q
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZX6 RRM domain-containing protein3.3e-13793.75Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRS+SPRDRPDSR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        ERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   RSPSPVRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSE NGDRSP Q
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

A0A1S3BNX5 serine/arginine-rich SC35-like splicing factor SCL30A isoform X14.2e-14898.26Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDR

Query:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSE NGDRSPGQ
Subjt:  PDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

A0A1S3BPL2 serine/arginine-rich SC35-like splicing factor SCL30A isoform X27.6e-15099.65Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSE NGDRSPGQ
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

A0A6J1DH06 serine/arginine-rich SC35-like splicing factor SCL30A isoform X13.9e-12285.62Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GRG  RDLPTSLLVRNL HDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPR
        GCVLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSP RYSRSPRYSRSPA R  RYSRSPAPRHARSRSRSYDY SPPPKQRA SRSVSPR
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPR

Query:  DRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        DR DSRERS+PRQ SRGRSYS+SPRL+GSRSRS SP RG  RS SP RGRS SR        S SRSRSP+ SPRHEEEYRS+ NGDRSP Q
Subjt:  DRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

A0A6J1DIJ4 serine/arginine-rich SC35-like splicing factor SCL30A isoform X27.1e-12486.81Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GRG  RDLPTSLLVRNL HDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPD
        GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP RYSRSPRYSRSPA R  RYSRSPAPRHARSRSRSYDY SPPPKQRA SRSVSPRDR D
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPD

Query:  SRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ
        SRERS+PRQ SRGRSYS+SPRL+GSRSRS SP RG  RS SP RGRS SR        S SRSRSP+ SPRHEEEYRS+ NGDRSP Q
Subjt:  SRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRG--RSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 103.9e-2640.7Show/hide
Query:  TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARE----RGSGR
        TSL VRN++ D R EDLRR FG++G I D+Y+P D+YT  PRGF +VQ+ D  DA DA H++D   + GR++ + FA+ +RK P+ M+A+E      S R
Subjt:  TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARE----RGSGR

Query:  FHDRRRSPLRYSRSPRYSRSPAQRRG---RYSRSPAPRHAR-----SRSRSY-DYASPPPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDG
        + D  R   R SRS  Y R  ++ R     Y RS +PR++R      RSRS+ D      + R++SRS   +    SR +S P++E + +S SRS     
Subjt:  FHDRRRSPLRYSRSPRYSRSPAQRRG---RYSRSPAPRHAR-----SRSRSY-DYASPPPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDG

Query:  SR--SRSDSPTRGRSPS----------PVRGRSLSRSRSRSKSVSRSRSRSPQHSPRH
        +R  S++DS T  +S S          P R +S SRS+SRS+S SRSRS +   S  H
Subjt:  SR--SRSDSPTRGRSPS----------PVRGRSLSRSRSRSKSVSRSRSRSPQHSPRH

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL285.2e-3142.42Show/hide
Query:  RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADA
        R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR  F +FG +KDIYLP++YYTGEPRGFGFV+Y    DAA+A
Subjt:  RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADA

Query:  KHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSR
           M+  V+ GRE+ +VFAEENRK P +MR     SGR  D +    RSP R  RS   SRSP +R  R+          S+ R  D  SP  + R+ SR
Subjt:  KHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSR

Query:  SVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKS
        S  PR+  + + R+            RSPR +            R  +P+R R LSRSRSRS S
Subjt:  SVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKS

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL305.4e-2841.16Show/hide
Query:  RSYTP---SPP-RGYGRRGRSPSP---------RGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA
        R Y+P   SPP RGYG RGRSP P          G   GR      SLLVRN+  DCRPE+LR PF +FG ++D+Y+P+DYY+G+PRGF FV++VD  DA
Subjt:  RSYTP---SPP-RGYGRRGRSPSP---------RGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA

Query:  ADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRS
         +A+  M+     GRE+TVV A E+RK+P +MR + R   R     R      RS   SRS +  R R  R P+   +R RSRSY   SP P++    R 
Subjt:  ADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRS

Query:  VSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPR
          PR   D  E    R  S G   + +   D  R+  D+  R +       R     R+ S+S S SRSRS + SPR
Subjt:  VSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPR

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A1.8e-7663.32Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRP
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSP      PRYSRSP  RRGR          RSRSRS  Y SPP K R  SRSVSP+DR 
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRP

Query:  DSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRS--PQHSPRHEEEYRSEQNGDRSPGQ
          +E          RSYSRSP  +GSR RS SP R +S S    RS+S  ++RS +  ++RS+S  P+ S       R  QNGDRSP Q
Subjt:  DSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRS--PQHSPRHEEEYRSEQNGDRSPGQ

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.7e-8266.08Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+P RY     YSR         SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+     
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS
             R + R RSYSRSP  DGSR RS +P RG+    SPSP R  S S  RSRS S  R+RS SP+ S  R     RS +   RS
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 331.2e-8366.08Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+P RY     YSR         SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+     
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS
             R + R RSYSRSP  DGSR RS +P RG+    SPSP R  S S  RSRS S  R+RS SP+ S  R     RS +   RS
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS

AT1G55310.2 SC35-like splicing factor 331.9e-8170.89Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+P RY     YSR         SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+     
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSR

Query:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPS
             R + R RSYSRSP  DGSR RS +P RG+S S
Subjt:  ERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPS

AT1G55310.3 SC35-like splicing factor 331.4e-7963.21Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDPA
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG            +PRGFGFVQ++DPA
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDPA

Query:  DAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAY
        DAADAKHHMDG +LLGRELTVVFAEENRKKP++MRARERG G RF DRRR+P RY     YSR         SRSP PR  RSRSRS DY SPPP+ R +
Subjt:  DAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAY

Query:  SRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS
         RS+SPR+          R + R RSYSRSP  DGSR RS +P RG+    SPSP R  S S  RSRS S  R+RS SP+ S  R     RS +   RS
Subjt:  SRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGR----SPSPVRGRSLSRSRSRSKSVSRSRSRSPQHS-PRHEEEYRSEQNGDRS

AT3G13570.1 SC35-like splicing factor 30A1.3e-7763.32Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRP
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSP      PRYSRSP  RRGR          RSRSRS  Y SPP K R  SRSVSP+DR 
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRP

Query:  DSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRS--PQHSPRHEEEYRSEQNGDRSPGQ
          +E          RSYSRSP  +GSR RS SP R +S S    RS+S  ++RS +  ++RS+S  P+ S       R  QNGDRSP Q
Subjt:  DSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRS--PQHSPRHEEEYRSEQNGDRSPGQ

AT5G18810.1 SC35-like splicing factor 283.7e-3242.42Show/hide
Query:  RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADA
        R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR  F +FG +KDIYLP++YYTGEPRGFGFV+Y    DAA+A
Subjt:  RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADA

Query:  KHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSR
           M+  V+ GRE+ +VFAEENRK P +MR     SGR  D +    RSP R  RS   SRSP +R  R+          S+ R  D  SP  + R+ SR
Subjt:  KHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSR

Query:  SVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKS
        S  PR+  + + R+            RSPR +            R  +P+R R LSRSRSRS S
Subjt:  SVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAGGGGTCGTAGCCCTAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCTACTAG
CCTTCTAGTTCGTAATCTTAGCCATGACTGCAGGCCTGAGGATCTTCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTG
GAGAACCACGAGGTTTTGGTTTTGTTCAATATGTGGATCCTGCTGATGCTGCAGATGCTAAACACCATATGGATGGCTGTGTTCTTCTTGGTCGGGAGTTGACTGTGGTA
TTTGCTGAGGAAAACAGGAAGAAACCATCTGATATGAGGGCAAGAGAGAGAGGAAGTGGGCGATTTCATGATCGAAGAAGATCTCCTCTGCGGTATTCTCGTTCACCTCG
ATATTCACGTTCCCCGGCTCAACGGCGTGGGAGGTATTCTCGTTCACCAGCTCCACGCCATGCAAGGTCTAGGTCTCGTAGTTATGATTATGCATCTCCACCACCAAAAC
AAAGGGCTTACTCAAGATCAGTGTCCCCTCGTGACAGACCAGACAGTCGAGAGAGGTCTTTCCCACGACAGGAGAGCCGTGGAAGATCGTACTCCCGATCTCCACGTCTA
GACGGTTCAAGGAGTAGGAGTGATAGTCCAACACGAGGTCGAAGTCCAAGCCCTGTAAGAGGACGAAGCCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTAGCCGGAG
CCGAAGCCGTAGTCCCCAACATAGTCCAAGACATGAAGAAGAGTATAGAAGTGAGCAGAATGGTGATCGGAGCCCAGGTCAATAG
mRNA sequenceShow/hide mRNA sequence
CGGATGCCCTGAACTTACAAATCTGAAGCAACGCCGTCTGTTTCTCCATCGAATATTTCAATTTCATCTTCTGAGCCCTAATTTCTTCTTTCTCTGCCGCCGATTCACTC
CCTCTTCAAGCTCCAGCGAGATTCTTAGACAGCGGGCCTTTGTCTTTAGTTGCTGTTCAAATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAG
GGGTCGTAGCCCTAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCTACTAGCCTTCTAGTTCGTAATCTTAGCCATGACTGCAGGCCTGAGGATCTTCGTA
GACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGAGAACCACGAGGTTTTGGTTTTGTTCAATATGTGGATCCTGCTGATGCT
GCAGATGCTAAACACCATATGGATGGCTGTGTTCTTCTTGGTCGGGAGTTGACTGTGGTATTTGCTGAGGAAAACAGGAAGAAACCATCTGATATGAGGGCAAGAGAGAG
AGGAAGTGGGCGATTTCATGATCGAAGAAGATCTCCTCTGCGGTATTCTCGTTCACCTCGATATTCACGTTCCCCGGCTCAACGGCGTGGGAGGTATTCTCGTTCACCAG
CTCCACGCCATGCAAGGTCTAGGTCTCGTAGTTATGATTATGCATCTCCACCACCAAAACAAAGGGCTTACTCAAGATCAGTGTCCCCTCGTGACAGACCAGACAGTCGA
GAGAGGTCTTTCCCACGACAGGAGAGCCGTGGAAGATCGTACTCCCGATCTCCACGTCTAGACGGTTCAAGGAGTAGGAGTGATAGTCCAACACGAGGTCGAAGTCCAAG
CCCTGTAAGAGGACGAAGCCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTAGCCGGAGCCGAAGCCGTAGTCCCCAACATAGTCCAAGACATGAAGAAGAGTATAGAA
GTGAGCAGAATGGTGATCGGAGCCCAGGTCAATAGGCAAGCAGTTCAAACTTGGGAAACTACAATTTACTATTGCCACTGTTTAATTTGATGTTTCCGCTATAGACATCA
TTTCTTAGTATTGTTGGCTAGCGTTTATTGTTCTTGGGAATTTGTGCTTTATCAAAAATTGATTGTTGAGTACTTTTATTTTTATGCTGTCTTTCGTGTGTTGCGATTGA
CACTTTACTATTTTCTTTTTGAGCTCGTTTTTTATATAGTTTGCTTTTGTATGCCACATATGTTACAATATAGCGCATGAGATTTAAACTTTTGACCTCCAC
Protein sequenceShow/hide protein sequence
MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVV
FAEENRKKPSDMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASPPPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRL
DGSRSRSDSPTRGRSPSPVRGRSLSRSRSRSKSVSRSRSRSPQHSPRHEEEYRSEQNGDRSPGQ