CuGenDBv2

Gene ID	IVF0005593
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Small ubiquitin-related modifier
Genome location	chr05:2391706..2391979
RNA-Seq Expression	IVF0005593
Synteny	IVF0005593
Gene Ontology terms	GO:0016925 - protein sumoylation (biological process) GO:0005634 - nucleus (cellular component) GO:0031386 - protein tag (molecular function) GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR022617 - Rad60/SUMO-like domain IPR029071 - Ubiquitin-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]

1.14e-32

100

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
        MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI

KGN47962.1 hypothetical protein Csa_004132 [Cucumis sativus]

1.77e-27

91.07

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI
        M SYC+RQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH GGGG GAI
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]

6.34e-22

79.25

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        M  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH GGGGG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]

4.34e-22

74.55

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
        M +YCKRQ LE  TIAFL+DGH I G QTA+ELG+EDGDEIDAMKHH GGGGG +
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI

XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]

7.22e-27

91.07

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI
        M SYC+RQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH GGGG GAI
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHV8 Ubiquitin-like domain-containing protein

3.5e-19

91.07

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI
        M SYC+RQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH GGGG GAI
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGG-GAI

A0A5A7V249 Small ubiquitin-related modifier 1

1.4e-23

100

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
        MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI

A0A6A2YGI1 Small ubiquitin-related modifier

1.5e-09

59.26

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA
        M +YC RQ ++F++IAFL DG  + G QT +EL +EDGDEIDAM H  GGGGG+
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier

1.8e-15

74.55

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI
        M +YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGD+IDAMKHH GGGGG +
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X2

2.4e-15

79.25

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        M  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH GGGGG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

SwissProt top hits

e value

%identity

Alignment

B3H5R8 Putative small ubiquitin-related modifier 8

2.8e-05

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        M++Y  +  +E ST+ FL DG+ I   QT  ELGLED DEI+A     GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

P55852 Small ubiquitin-related modifier 1

6.4e-10

54.72

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        M +YC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

P55857 Small ubiquitin-related modifier 1

1.9e-09

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        M +YC RQ ++ + IAFL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q9FLP5 Small ubiquitin-related modifier 3

9.5e-06

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        MY YC R+ L+    AF+ +G  I G +T +EL +EDGD IDA +   GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q9FLP6 Small ubiquitin-related modifier 2

3.7e-10

56.86

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        M +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

Arabidopsis top hits

e value

%identity

Alignment

AT4G26840.1 small ubiquitin-like modifier 1

4.5e-11

54.72

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        M +YC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

AT5G55160.1 small ubiquitin-like modifier 2

2.7e-11

56.86

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        M +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

AT5G55160.2 small ubiquitin-like modifier 2

2.7e-11

56.86

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        M +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

AT5G55170.1 small ubiquitin-like modifier 3

6.8e-07

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        MY YC R+ L+    AF+ +G  I G +T +EL +EDGD IDA +   GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

AT5G55856.1 Ubiquitin-like superfamily protein

2.0e-06

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Query:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        M++Y  +  +E ST+ FL DG+ I   QT  ELGLED DEI+A     GG
Subjt:  MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Sequences

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CDS sequence

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ATGTATTCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTCGTGGACGGCCATCCCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGA
TGGAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCAATCTGA

mRNA sequence

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ATGTATTCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTCGTGGACGGCCATCCCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGA
TGGAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCAATCTGA

Protein sequence

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MYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGAI

IVF0005593 (gene) of Melon (IVF77) v1 genome