; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005650 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005650
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr10:16683716..16683965
RNA-Seq ExpressionIVF0005650
SyntenyIVF0005650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032451.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.89e-0973.17Show/hide
Query:  SQNRGIFDAVNVVGKHDAGRGIPDIVLFTCRKCHSRLRFPN
        S  RGI DAV+VV KHD GRGIPD+VLF  RKC SRLRFP+
Subjt:  SQNRGIFDAVNVVGKHDAGRGIPDIVLFTCRKCHSRLRFPN
TrEMBL top hitse value%identityAlignment
A0A5A7SSC5 CACTA en-spm transposon protein4.0e-0773.17Show/hide
Query:  SQNRGIFDAVNVVGKHDAGRGIPDIVLFTCRKCHSRLRFPN
        S  RGI DAV+VV KHD GRGIPD+VLF  RKC SRLRFP+
Subjt:  SQNRGIFDAVNVVGKHDAGRGIPDIVLFTCRKCHSRLRFPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAAACGTCAGAAGATATCATTCCCGATGCTACGATATGAGTCGACAAAAAAGACGTCGGGAGAGGTATTCCCAAAATCGAGGTATTTTCGATGCCGTCAACGT
TGTCGGGAAACACGACGCCGGTAGAGGCATTCCTGACATCGTGTTGTTCACGTGTCGGAAGTGCCACTCCCGACTCAGGTTTCCCAACGTAGGGTCCGACGTCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACAAAAACGTCAGAAGATATCATTCCCGATGCTACGATATGAGTCGACAAAAAAGACGTCGGGAGAGGTATTCCCAAAATCGAGGTATTTTCGATGCCGTCAACGT
TGTCGGGAAACACGACGCCGGTAGAGGCATTCCTGACATCGTGTTGTTCACGTGTCGGAAGTGCCACTCCCGACTCAGGTTTCCCAACGTAGGGTCCGACGTCACGTAA
Protein sequenceShow/hide protein sequence
MHKNVRRYHSRCYDMSRQKRRRERYSQNRGIFDAVNVVGKHDAGRGIPDIVLFTCRKCHSRLRFPNVGSDVT