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IVF0005668 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005668
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-protease polyprotein
Genome locationchr05:5286189..5286434
RNA-Seq ExpressionIVF0005668
SyntenyIVF0005668
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK28602.1 gag-protease polyprotein [Cucumis melo var. makuwa]8.24e-0861.54Show/hide
Query:  TATMEMGRDGEDFPGLRSGPSRSCRMAYGERMTTPVAPQGA---SMAIAGLG
        TAT  +G DG DFP L SGPSRSC+ AYGER+TTP  PQG    S  +A LG
Subjt:  TATMEMGRDGEDFPGLRSGPSRSCRMAYGERMTTPVAPQGA---SMAIAGLG
TrEMBL top hitse value%identityAlignment
A0A5D3DYF4 Gag-protease polyprotein3.2e-0552.38Show/hide
Query:  TATMEMGRDGEDFPGLRSGPSRSCRMAYGERMTTPVAPQGA-----SMAIAGLGRSRGQRQKG
        TAT  +G DG DFP L SGPSRSC+ AYGER+TTP  PQG       +A  G    R   +KG
Subjt:  TATMEMGRDGEDFPGLRSGPSRSCRMAYGERMTTPVAPQGA-----SMAIAGLGRSRGQRQKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAACCCCGGCTCTACGCAACGGCGACAATGGAAATGGGTAGGGATGGCGAAGATTTCCCAGGACTCCGCTCGGGTCCTTCTAGGTCGTGTCGGATGGCGTACGG
AGAGAGGATGACAACCCCGGTGGCACCGCAAGGGGCGTCGATGGCTATCGCCGGACTTGGCAGATCCAGAGGCCAACGTCAAAAAGGAACAGGAAAAGAAAAGAGTTGTC
GCACACCGCTGACAACGTTTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAACCCCGGCTCTACGCAACGGCGACAATGGAAATGGGTAGGGATGGCGAAGATTTCCCAGGACTCCGCTCGGGTCCTTCTAGGTCGTGTCGGATGGCGTACGG
AGAGAGGATGACAACCCCGGTGGCACCGCAAGGGGCGTCGATGGCTATCGCCGGACTTGGCAGATCCAGAGGCCAACGTCAAAAAGGAACAGGAAAAGAAAAGAGTTGTC
GCACACCGCTGACAACGTTTGGATAA
Protein sequenceShow/hide protein sequence
MAQPRLYATATMEMGRDGEDFPGLRSGPSRSCRMAYGERMTTPVAPQGASMAIAGLGRSRGQRQKGTGKEKSCRTPLTTFG