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IVF0005702 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005702
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:25238600..25238785
RNA-Seq ExpressionIVF0005702
SyntenyIVF0005702
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054154.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.93e-33100Show/hide
Query:  MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
        MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
Subjt:  MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
TrEMBL top hitse value%identityAlignment
A0A5A7UG56 Ty3-gypsy retrotransposon protein9.6e-26100Show/hide
Query:  MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
        MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
Subjt:  MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGACGCGGAATGGCTCGTCCGACGTGGGTCATTGCGGCGTCAACGTGGGTCGGCGCGGAATGGATCGTCCGACGTGGGTTGTCACGGCGTCGACGTGGGTCTTC
GCAGCGTGTCGACGTGGGTCTTCGCGGCATGGGTCGTCGGCATGAGTTGCGCGGAAGGTTCAGTCACCGTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGACGCGGAATGGCTCGTCCGACGTGGGTCATTGCGGCGTCAACGTGGGTCGGCGCGGAATGGATCGTCCGACGTGGGTTGTCACGGCGTCGACGTGGGTCTTC
GCAGCGTGTCGACGTGGGTCTTCGCGGCATGGGTCGTCGGCATGAGTTGCGCGGAAGGTTCAGTCACCGTGGGTAA
Protein sequenceShow/hide protein sequence
MGRRGMARPTWVIAASTWVGAEWIVRRGLSRRRRGSSQRVDVGLRGMGRRHELRGRFSHRG