CuGenDBv2

Gene ID	IVF0005719
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RNA polymerase II subunit 5-mediating protein homolog isoform X1
Genome location	chr11:17648120..17651996
RNA-Seq Expression	IVF0005719
Synteny	IVF0005719
Gene Ontology terms	NA
InterPro domains	IPR004127 - Prefoldin alpha-like IPR009053 - Prefoldin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0062034.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]

1.26e-239

96.8

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

TYK04987.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]

1.38e-240

97.6

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_004139947.1 RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis sativus]

7.29e-216

88.53

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        ME+GRVKGTVT L+SLFPAQDARKAASRVQ AISE Q++LEQL+GFITDN+N+IKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQT EILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAE+GLVEIKEEYVEENFCEQE TSGVNKQDV  VSGVD+AKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEK T NQSLE+FY DKQS S+GSTS W RDENVSSKELL+KYQKQQEASTNPSNCSGLSVQ+SPKEDVTSGN+SLT+S
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRV NPNPAAKSV FAEVKEK QTLPPST+QAFTGSIIERPPIIPKTSKQETET LQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_008448308.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis melo]

4.93e-239

97.33

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_016900539.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo]

9.26e-242

97.6

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB27 Uncharacterized protein

4.2e-169

88.53

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        ME+GRVKGTVT L+SLFPAQDARKAASRVQ AISE Q++LEQL+GFITDN+N+IKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQT EILKRRGKALDSQVDSLKA MDNLKAEASFFDATASEAE+GLVEIKEEYVEENFCEQE TSGVNKQDV  VSGVD+AKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEK T NQSLE+FY DKQS S+GSTS W RDENVSSKELL+KYQKQQEASTNPSNCSGLSVQ+SPKEDVTSGN+SLT+S
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRV NPNPAAKSV FAEVKEK QTLPPST+QAFTGSIIERPPIIPKTSKQETET LQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A1S3BK98 RNA polymerase II subunit 5-mediating protein homolog isoform X2

1.3e-186

97.33

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A1S4DX32 RNA polymerase II subunit 5-mediating protein homolog isoform X1

8.2e-189

97.6

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A5A7V404 RNA polymerase II subunit 5-mediating protein-like protein isoform X1

3.4e-187

96.8

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A5D3BZL3 RNA polymerase II subunit 5-mediating protein-like protein isoform X1

8.2e-189

97.6

Show/hide

Query:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER
        MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG         VLLGEGYYAER
Subjt:  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAER

Query:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
        TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD
Subjt:  TSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFD

Query:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
        ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Subjt:  ELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS

Query:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

SwissProt top hits

e value

%identity

Alignment

O94763 Unconventional prefoldin RPB5 interactor 1

4.7e-08

24.4

Show/hide

Query:  PLSSLFP--AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEIL
        P  +L P  A D  +     +  ++  Q++++  +    D   + + +  LP++L + +MVPFG  AF PG         VLLG+ ++A+ ++KQ V ++
Subjt:  PLSSLFP--AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEIL

Query:  KRRGKALDSQVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKE------EYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDE
        + R + +   +D LK  M N ++   F +     S+A   +V+I+E      E+  ++    +  S     D+      ++ K  ++ A+   + AR +E
Subjt:  KRRGKALDSQVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKE------EYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDE

Query:  LEKEEELAAANGNKSD---------DEDEEEKETPNQSLEKFYDDKQSYS
        LE++EEL     +K D            EEEKE  N ++   +    S++
Subjt:  LEKEEELAAANGNKSD---------DEDEEEKETPNQSLEKFYDDKQSYS

Q3B7M7 Unconventional prefoldin RPB5 interactor

3.0e-07

24.46

Show/hide

Query:  AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDS
        A +  +     +  ++  Q+K++  +    D   + + +  LP++L + +MVPFG  AF PG         VLLG+ ++A+ ++KQ V +++ R + +  
Subjt:  AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDS

Query:  QVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMA------RFDELEKEEEL--
         +D LK  M N ++   F +     S+A   +V+I+EE   +   + +           + S + EA+ A  D +   ++A      R +ELE++EEL  
Subjt:  QVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMA------RFDELEKEEEL--

Query:  ----------AAANGNKSDDEDEEEKETPNQSL
                    ANG     E+E+E +  N ++
Subjt:  ----------AAANGNKSDDEDEEEKETPNQSL

Q3TLD5 Unconventional prefoldin RPB5 interactor

1.5e-06

24.89

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Query:  AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDS
        A +  +     +  ++  Q+K++  +    D   + + ++ LP++L ++VMVPFG  AF PG         VLLG+ ++A+ ++KQ V +++ R + +  
Subjt:  AQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDS

Query:  QVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAE-------IDAEYARMMARFDELEKEEELA
         +D  K  + N ++   F +     S+A    V+I+EE   +   + +           + S + EA            DA+   + AR +ELE++EEL 
Subjt:  QVDSLKATMDNLKAEASFFD--ATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAE-------IDAEYARMMARFDELEKEEELA

Query:  AANGNKSDD---------EDEEEKE
            +K D            EEEKE
Subjt:  AANGNKSDD---------EDEEEKE

Q54HG4 RNA polymerase II subunit 5-mediating protein homolog

2.2e-13

27.44

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Query:  RVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATM
        + +  + E Q  +E+L+    D + +I  +Q LP+ L  ++MVP GK AFF G         +LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +
Subjt:  RVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATM

Query:  DNLKAEAS----FFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV------------DEAKIAEIDAEYARMMARFDELEKEEELAAA
          LK   S       A   +  + +VEIKEEY  +   E+E       Q  T  +              ++ K  E+D E+ +M+ R   LE++E     
Subjt:  DNLKAEAS----FFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV------------DEAKIAEIDAEYARMMARFDELEKEEELAAA

Query:  NGNKSDDEDEEE-KETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSN
             DD DEEE  +  N+ L+    D++   +   +    D++    +  + YQ++      P N
Subjt:  NGNKSDDEDEEE-KETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G03760.1 Prefoldin chaperone subunit family protein

1.6e-48

37.8

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Query:  KGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTV
        KGTVTPL   F  +D RKAAS ++  I E + ++ +LQ ++ +N+N+I LV+KLP++LHH VMVPFGK AFFPG         VLLGE YY +R+SKQTV
Subjt:  KGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPG---------VLLGEGYYAERTSKQTV

Query:  EILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDELEKEE
        + LKRR K L SQ+ SLKA +++L+ EASFF  TASE  +GLVEI+EEYVEE+     +     K+      G  E    E D ++AR+MAR +ELE EE
Subjt:  EILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDELEKEE

Query:  ELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQ-------
        EL   +G    D   E+ ++  +S+E+   D    S G T     +           Y KQ+   + P+  SG S  SSP+       + + Q       
Subjt:  ELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQ-------

Query:  ----------------------SQRVRNPNPAAKSVKFAEVKEKTQTLPP------------STSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSK
                                R   P   A++ K      KT  L P             +++AFTGSI+E   I+  ++  +T    Q S SQPSK
Subjt:  ----------------------SQRVRNPNPAAKSVKFAEVKEKTQTLPP------------STSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSK

Query:  PVSRFKMQRR
        PVSRF+ +RR
Subjt:  PVSRFKMQRR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCAGGACGCGTAAAGGGAACAGTGACGCCGTTATCCTCCTTATTTCCGGCTCAGGATGCCCGCAAGGCTGCGTCGCGCGTCCAAGCTGCGATTTCTGAGAACCA
GAAGAAGCTCGAGCAACTCCAAGGATTCATAACTGATAACGAAAATATGATCAAGCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTTATGGTTCCATTTGGGA
AGGCAGCGTTTTTCCCGGGCGTTCTTCTCGGGGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATTTTGAAAAGGAGAGGTAAGGCTTTGGATTCTCAA
GTTGATTCTCTGAAGGCCACGATGGATAATCTTAAAGCCGAGGCCTCATTTTTTGATGCTACAGCTTCTGAGGCTGAGGAGGGTCTAGTCGAGATAAAGGAGGAATATGT
GGAAGAAAACTTTTGCGAGCAGGAATTGACATCAGGAGTGAACAAGCAAGATGTTACTAGAGTTTCTGGAGTTGACGAGGCAAAGATTGCAGAAATCGATGCAGAATATG
CCCGTATGATGGCCAGATTCGACGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCAACAAAAGTGATGATGAGGATGAGGAAGAGAAAGAAACTCCAAATCAA
TCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAGAGGGAAGTACATCTGCGTGGCTGAGGGATGAAAATGTAAGCAGTAAAGAGCTACTGGATAAGTATCAGAA
ACAACAAGAGGCTTCTACCAATCCATCAAATTGTTCAGGGCTGTCGGTACAATCGTCACCCAAAGAGGATGTAACAAGTGGCAACAGTTCTTTGACTCAGTCTCAGCGAG
TGAGAAACCCTAATCCTGCTGCAAAGTCTGTAAAGTTTGCTGAAGTAAAAGAAAAGACTCAAACATTGCCTCCATCTACCAGTCAGGCTTTCACAGGATCCATAATTGAG
CGTCCTCCTATCATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCCAAACCAGTATCCAGATTCAAGATGCAAAGAAGATA
G

mRNA sequence

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Protein sequence

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MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEELHHEVMVPFGKAAFFPGVLLGEGYYAERTSKQTVEILKRRGKALDSQ
VDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQ
SLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIE
RPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

IVF0005719 (gene) of Melon (IVF77) v1 genome