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IVF0005727 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005727
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
Genome locationchr10:863664..866514
RNA-Seq ExpressionIVF0005727
SyntenyIVF0005727
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446752.1 PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo]2.73e-93100Show/hide
Query:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
        MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
Subjt:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

XP_011655831.2 glycine-rich protein DOT1 [Cucumis sativus]9.77e-7682.8Show/hide
Query:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGG------------AAAAGGGENGGGS
         RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYT+K GKYGVTNQI+RRYS+SAITVSNVIRR +G             AAAAGGGENGG S
Subjt:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGG------------AAAAGGGENGGGS

Query:  RPHTGGGTAVIPVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        RP TGGGTAVIPVYAAGSAQA HRQGR HNAGN YENN GLLVAAVLAAIAHLCRV+
Subjt:  RPHTGGGTAVIPVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

XP_022957462.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]1.19e-4767.81Show/hide
Query:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGG-TAVI
         RR + L+FLLFCST+   S+ALQQQI PT  ESNY QKT   K GK GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP  GGG  AVI
Subjt:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGG-TAVI

Query:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        PVYAAGSAQA HRQGR  NAGN YENN GLLVA+VLAAI HL  V+
Subjt:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

XP_023517064.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]2.93e-4868.49Show/hide
Query:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGG-TAVI
         RR + L+FLLFCST+   S+ALQQQI PT  ESNY QKT   K GK GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP  GGG  AVI
Subjt:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGG-TAVI

Query:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        PVYAAGSAQA HRQGR  NAGN YENN GLLVA+VLAAIAHL  V+
Subjt:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

XP_038892711.1 uncharacterized protein LOC120081693 [Benincasa hispida]8.84e-6477.93Show/hide
Query:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVIP
         RR +RLI LL CST+AISSAALQQQIFPT  ESNYQQKTYT K+ K G+TNQI+RRYSA+ ITVSN I +   G+A AGGGENGGGSRPH GGGTAVIP
Subjt:  ERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVIP

Query:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        VYAAGSAQA HRQGRPHNAGN +ENN GLLVAAVLAAIAHL  V+
Subjt:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

TrEMBL top hitse value%identityAlignment
A0A0A0KUR6 Uncharacterized protein1.3e-5785.53Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRR--------ANGGAAAAGGGENGGGSRPHTG
        RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYT+K GKYGVTNQI+RRYS+SAITVSNVIRR         +G AAAAGGGEN GGSRP TG
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRR--------ANGGAAAAGGGENGGGSRPHTG

Query:  GGTAVIPVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        GGTAVIPVYAAGSAQA HRQGR HNAGN YENN GLLVAAVLAAIAHLCRV+
Subjt:  GGTAVIPVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

A0A1S3BFU8 uncharacterized protein LOC1034893821.8e-70100Show/hide
Query:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
        MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
Subjt:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

A0A5A7SUI0 Uncharacterized protein1.8e-70100Show/hide
Query:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
        MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI
Subjt:  MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVI

Query:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
Subjt:  PVYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

A0A6J1GZ71 glycine-rich RNA-binding protein GRP1A-like1.4e-3568.28Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHT-GGGTAVIP
        RR + L+FLLFCST+   S+ALQQQI P  TESNY QKT   K GK GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP   GGG AVIP
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHT-GGGTAVIP

Query:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        VYAAGSAQA HRQGR  NAGN YENN GLLVA+VLAAI HL  V+
Subjt:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

A0A6J1JB47 uncharacterized protein LOC1114851593.2e-3567.59Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHT-GGGTAVIP
        RR + L+FLLFCST+   S+A QQQI P  TE NY QKT   K G+ GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP   GGG AVIP
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHT-GGGTAVIP

Query:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY
        VYAAGSAQA HRQGRP NAGN YENN GLLVA+VLAAIAHL  V+
Subjt:  VYAAGSAQARHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAGAGGGATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCGGCTCTCCAACAGCAAATCTTCCCAACAGCAACAGAGTCTAATTA
CCAACAGAAAACTTACACAAGAAAACAGGGCAAATATGGGGTTACTAACCAGATTAGCAGAAGATACAGTGCAAGTGCAATCACCGTTTCTAATGTGATTCGTCGTGCAA
ATGGAGGTGCAGCCGCTGCCGGCGGTGGAGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCTGTTTATGCAGCTGGTTCAGCACAAGCA
CGTCACCGCCAAGGTCGACCACATAATGCAGGAAATGGCTATGAGAACAATACGGGGCTTCTGGTAGCTGCAGTTTTGGCCGCCATTGCTCATCTCTGTAGAGTTTACTG
A
mRNA sequenceShow/hide mRNA sequence
GTGAAAACCGTGTCCTGATTCTGAAGGCACTTCAACAGTTTCAGGAGGAAAAAAAAAGAAAGAAATATTCGATACTTTTTAAAAGTATGTATTATTCTACGTGTCCGTGT
GCTTAAAGAGATAAGAGTGCTTTAGTGGATTGGAAGAAGAAAAAACCTAAGAACTTCCACTTCCCCCGTTTTATATAAATAAATCAGAGTAGAAGACCGTTTTCGCATTA
CCTAATAGAGAGAAGATAGCTATTCCTATTACAACAATGGAAAGAAGAGGGATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCGGCTCTCCA
ACAGCAAATCTTCCCAACAGCAACAGAGTCTAATTACCAACAGAAAACTTACACAAGAAAACAGGGCAAATATGGGGTTACTAACCAGATTAGCAGAAGATACAGTGCAA
GTGCAATCACCGTTTCTAATGTGATTCGTCGTGCAAATGGAGGTGCAGCCGCTGCCGGCGGTGGAGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCC
GTGATCCCTGTTTATGCAGCTGGTTCAGCACAAGCACGTCACCGCCAAGGTCGACCACATAATGCAGGAAATGGCTATGAGAACAATACGGGGCTTCTGGTAGCTGCAGT
TTTGGCCGCCATTGCTCATCTCTGTAGAGTTTACTGATATCAAGGCTGTCTCCATTGGGACACAATAACATTGTTACATTGTTGAGCTTTCGTTTCCTGTCAAGGTCAAG
AAAAAAGCAAAATATTTGGATTGTAAATGATTGTATGTGCAGAGAGAGAACCTCATAAAGTCTTTTTTTTTTTTTTTCTTGTTCTGGGTGACCGTTGTATTGTACATAGA
CAGAAGTATTTTAATTGCGTCAATTAGATAATCTTCTGACAGGCATTACAATCACATAACTGAAATTATTTTATGTAAGAAACTAGTGAGAATTTCACCTCGGTTAATAT
TCCAGTTCTCTACAACCTTGATGGTCAGA
Protein sequenceShow/hide protein sequence
MERRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSASAITVSNVIRRANGGAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQA
RHRQGRPHNAGNGYENNTGLLVAAVLAAIAHLCRVY