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IVF0005735 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005735
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontapetum determinant 1
Genome locationchr10:25155243..25155555
RNA-Seq ExpressionIVF0005735
SyntenyIVF0005735
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESQ54814.1 hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum]3.35e-3058.33Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y+V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ + LS+S   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

XP_006413361.2 protein TAPETUM DETERMINANT 1 isoform X1 [Eutrema salsugineum]1.93e-2958.33Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y+V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ + LS+S   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

XP_010535235.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana]4.21e-3157.32Show/hide
Query:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        NGIPT++V+ITNQC   C+I D+HL CG F+S++ I P +FKRL+ +DCLVN G P+ +G T+SFQYAT+++F LS+SS +C
Subjt:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

XP_015579392.1 protein TAPETUM DETERMINANT 1-like [Ricinus communis]1.33e-2959.76Show/hide
Query:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        NGIPTY VQITN C   C I  +H++CG F+S+  INP+IFKRL  DDCLVNNG P+ YG T+SF+Y+ TY++ LS+SS  C
Subjt:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

XP_024005303.1 protein TAPETUM DETERMINANT 1 isoform X2 [Eutrema salsugineum]1.83e-2958.33Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y+V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ + LS+S   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

TrEMBL top hitse value%identityAlignment
A0A0A0LUG9 Uncharacterized protein1.5e-2160.49Show/hide
Query:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        GIPTY V++ N C   C IY +H KCG F+S+  INPR+FKRL  DDCLVN+G P+ YG TLSFQYA TY + LS+SS  C
Subjt:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

A0A1S3B0P8 protein TAPETUM DETERMINANT 11.5e-2160.49Show/hide
Query:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        GIPTY V++ N C   C IY +H KCG F+S+  INPR+FKRL  DDCLVN+G P+ YG TLSFQYA TY + LS+SS  C
Subjt:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

A0A5A7UPF3 Protein TAPETUM DETERMINANT 11.5e-2160.49Show/hide
Query:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        GIPTY V++ N C   C IY +H KCG F+S+  INPR+FKRL  DDCLVN+G P+ YG TLSFQYA TY + LS+SS  C
Subjt:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

A0A5D3BLS2 Protein TAPETUM DETERMINANT 11.5e-2160.49Show/hide
Query:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        GIPTY V++ N C   C IY +H KCG F+S+  INPR+FKRL  DDCLVN+G P+ YG TLSFQYA TY + LS+SS  C
Subjt:  GIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

V4MEA8 Uncharacterized protein (Fragment)1.2e-2158.33Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y+V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ + LS+S   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058351.1e-0535.8Show/hide
Query:  YKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRL--AVDDCLVNNGSPINYGETLSFQYATTYMFSLS--ISSFKC
        ++V++ N+C   C I +L LKC  F   S ++P   + L  +  +C+VN+G P++  +TLSF Y+ T+ F+L     SF+C
Subjt:  YKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRL--AVDDCLVNNGSPINYGETLSFQYATTYMFSLS--ISSFKC

Q1G3T1 TPD1 protein homolog 12.7e-2047.56Show/hide
Query:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        +G+P+Y V+I N C  +C I ++H+ CG F+S   +NPR+F+RL  DDCLVN+G P+  G++LSFQYA ++ + LS++S  C
Subjt:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

Q2QR54 TPD1 protein homolog 1A8.2e-1742.05Show/hide
Query:  NGIPTYKVQITNQCFG------NCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        +G+P Y V + N+C G       C I  +H++CG F+S S ++PR+F+RL  DDCL+N+G P+  GET+SF+Y  ++ + LS+S   C
Subjt:  NGIPTYKVQITNQCFG------NCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

Q6TLJ2 Protein TAPETUM DETERMINANT 11.3e-2254.76Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ +G TLSF YA T+ + LS++   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

Q8S6P9 TPD1 protein homolog 1B3.5e-1540.24Show/hide
Query:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        +GIPTY V+I N C   CT+YD+H+ CG F S+  ++P  F+R+  +DCLV  G  +   E +SFQY+ ++ + L++++  C
Subjt:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein7.9e-0735.8Show/hide
Query:  YKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRL--AVDDCLVNNGSPINYGETLSFQYATTYMFSLS--ISSFKC
        ++V++ N+C   C I +L LKC  F   S ++P   + L  +  +C+VN+G P++  +TLSF Y+ T+ F+L     SF+C
Subjt:  YKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRL--AVDDCLVNNGSPINYGETLSFQYATTYMFSLS--ISSFKC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown1.9e-2147.56Show/hide
Query:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        +G+P+Y V+I N C  +C I ++H+ CG F+S   +NPR+F+RL  DDCLVN+G P+  G++LSFQYA ++ + LS++S  C
Subjt:  NGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC

AT4G24972.1 tapetum determinant 19.3e-2454.76Show/hide
Query:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC
        M NGIP Y V+ITNQC   C I  +H+ CG F+S+  INPR+FKR+  DDCLVNNG P+ +G TLSF YA T+ + LS++   C
Subjt:  MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATGGAATCCCAACGTATAAGGTGCAGATAACAAATCAATGTTTTGGCAATTGCACTATATACGATCTGCATCTCAAATGTGGATCCTTCAACTCTTCTAGCTC
AATAAATCCTCGCATCTTCAAGAGACTCGCGGTCGACGATTGTCTTGTCAACAATGGATCACCAATTAACTATGGGGAAACTCTTTCTTTTCAATATGCTACTACGTATA
TGTTTTCTCTTTCCATTTCCTCTTTTAAATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATTTGAAAAGAATTGCGATGGAAATTCGGTAGCAATAAGCCAAGGAGAAGGGGATCGAATGTTCAATGGAATCCCAACGTATAAGGTGCAGATAACAAATCAATGTTTTG
GCAATTGCACTATATACGATCTGCATCTCAAATGTGGATCCTTCAACTCTTCTAGCTCAATAAATCCTCGCATCTTCAAGAGACTCGCGGTCGACGATTGTCTTGTCAAC
AATGGATCACCAATTAACTATGGGGAAACTCTTTCTTTTCAATATGCTACTACGTATATGTTTTCTCTTTCCATTTCCTCTTTTAAATGTTAG
Protein sequenceShow/hide protein sequence
MFNGIPTYKVQITNQCFGNCTIYDLHLKCGSFNSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFSLSISSFKC