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IVF0005757 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005757
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr10:26615852..26616079
RNA-Seq ExpressionIVF0005757
SyntenyIVF0005757
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033316.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]1.03e-0470.97Show/hide
Query:  GSPRCGSPSPRRKDVEMRRMGLRLGFSSCVV
        G  R GSP  RRKD+EMRR+GLRLGFS CV+
Subjt:  GSPRCGSPSPRRKDVEMRRMGLRLGFSSCVV
KAA0034002.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.84e-1673.21Show/hide
Query:  RYGSPRCGSPSPRRKDVEMRRMGLRLGFSSCVV---RKWSVREEGKIGILKKESEG
        RYGSPR GSPS RRKD+EMRRMGLRLGFSSCVV    + +V +EGK GILKKE+ G
Subjt:  RYGSPRCGSPSPRRKDVEMRRMGLRLGFSSCVV---RKWSVREEGKIGILKKESEG
TrEMBL top hitse value%identityAlignment
A0A5D3BST2 CACTA en-spm transposon protein3.2e-1173.21Show/hide
Query:  RYGSPRCGSPSPRRKDVEMRRMGLRLGFSSC---VVRKWSVREEGKIGILKKESEG
        RYGSPR GSPS RRKD+EMRRMGLRLGFSSC   VV + +V +EGK GILKKE+ G
Subjt:  RYGSPRCGSPSPRRKDVEMRRMGLRLGFSSC---VVRKWSVREEGKIGILKKESEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGAAAGATCAAGAACCCATCGGCAACGATATGGGTCTCCTCGCTGTGGGTCTCCGTCGCCGAGAAGAAAGGATGTGGAGATGAGAAGAATGGGGTTAAGGTT
GGGGTTTTCGTCGTGCGTCGTTCGTAAATGGAGCGTGCGGGAAGAAGGAAAGATAGGGATTTTGAAGAAGGAAAGTGAGGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGAAAGATCAAGAACCCATCGGCAACGATATGGGTCTCCTCGCTGTGGGTCTCCGTCGCCGAGAAGAAAGGATGTGGAGATGAGAAGAATGGGGTTAAGGTT
GGGGTTTTCGTCGTGCGTCGTTCGTAAATGGAGCGTGCGGGAAGAAGGAAAGATAGGGATTTTGAAGAAGGAAAGTGAGGGATTTTGA
Protein sequenceShow/hide protein sequence
MKNERSRTHRQRYGSPRCGSPSPRRKDVEMRRMGLRLGFSSCVVRKWSVREEGKIGILKKESEGF