CuGenDBv2

Gene ID	IVF0005777
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ABC transporter A family member 1 isoform A
Genome location	chr08:15585072..15598351
RNA-Seq Expression	IVF0005777
Synteny	IVF0005777
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056173.1 ABC transporter A family member 1 isoform X7 [Cucumis melo var. makuwa]

3.55e-82

99.28

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Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

TYK11077.1 ABC transporter A family member 1 isoform X7 [Cucumis melo var. makuwa]

3.58e-83

100

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Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

XP_008460747.1 PREDICTED: ABC transporter A family member 1 isoform X2 [Cucumis melo]

3.98e-82

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

XP_008460748.1 PREDICTED: ABC transporter A family member 1 isoform X3 [Cucumis melo]

3.98e-82

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

XP_008460752.1 PREDICTED: ABC transporter A family member 1 isoform X7 [Cucumis melo]

3.75e-82

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CCN6 ABC transporter A family member 1 isoform X1

8.1e-71

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

A0A1S3CD42 ABC transporter A family member 1 isoform X3

8.1e-71

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

A0A1S3CD80 ABC transporter A family member 1 isoform X7

8.1e-71

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

A0A5A7UJN7 ABC transporter A family member 1 isoform X7

8.1e-71

99.28

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFP+LEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

A0A5D3CGH2 ABC transporter A family member 1 isoform X7

4.8e-71

100

Show/hide

Query:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
        MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM
Subjt:  MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTM

Query:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
        LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA
Subjt:  LHLMSLKFPLLEVVTRVYKDEQELEAYIRSDLYGNCNVA

SwissProt top hits

e value

%identity

Alignment

Q84M24 ABC transporter A family member 1

1.3e-41

65.15

Show/hide

Query:  RQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMS
        RQ K MLRKNWLLK RHPF+TSAEILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL  L   G++LAFAPDT ET  M+ ++S
Subjt:  RQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMS

Query:  LKFPLLEVVTRVYKDEQELEAYIRSDLYGNCN
        LKFP L +VT+++KD+ ELE YI S  YG C+
Subjt:  LKFPLLEVVTRVYKDEQELEAYIRSDLYGNCN

Arabidopsis top hits

e value

%identity

Alignment

AT2G41700.1 ATP-binding cassette A1

9.3e-43

65.15

Show/hide

Query:  RQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMS
        RQ K MLRKNWLLK RHPF+TSAEILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL  L   G++LAFAPDT ET  M+ ++S
Subjt:  RQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMS

Query:  LKFPLLEVVTRVYKDEQELEAYIRSDLYGNCN
        LKFP L +VT+++KD+ ELE YI S  YG C+
Subjt:  LKFPLLEVVTRVYKDEQELEAYIRSDLYGNCN

AT2G41700.2 ATP-binding cassette A1

1.4e-30

60.55

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Query:  EILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMSLKFPLLEVVTRVYKDEQELEAYI
        +ILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL  L   G++LAFAPDT ET  M+ ++SLKFP L +VT+++KD+ ELE YI
Subjt:  EILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMSLKFPLLEVVTRVYKDEQELEAYI

Query:  RSDLYGNCN
         S  YG C+
Subjt:  RSDLYGNCN

Sequences

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CDS sequence

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ATGAGACCTGCATGGAGGCAGCTCAAGGTTATGCTCCGCAAGAACTGGCTCCTCAAAATTCGCCACCCTTTCATCACCTCTGCAGAGATTTTACTTCCGACTGTGGTGAT
GTTGTTACTGATAGCCGTAAGGACGCAAGTTGATAACACAGTCCATCCTCCGCAACCGCATATACAAAAAGGAATGTTCGTAGAAGTTGGCAAAGGCATATCTCCAAGTT
TCCAAGAAGTTTTGGTGTCACTGCAGAAAAATGGAGAATATTTGGCTTTTGCACCAGACACAGTCGAGACAAAGACCATGCTACATTTGATGTCATTAAAATTTCCTCTT
TTAGAGGTAGTTACTAGAGTTTACAAAGATGAACAAGAGCTCGAAGCCTACATTCGTTCTGATCTATATGGAAACTGCAATGTAGCTAACTTCAGCAAGTCATGGATTCA
TTTATAA

mRNA sequence

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Protein sequence

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MRPAWRQLKVMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLAFAPDTVETKTMLHLMSLKFPL
LEVVTRVYKDEQELEAYIRSDLYGNCNVANFSKSWIHL

IVF0005777 (gene) of Melon (IVF77) v1 genome