; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005778 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005778
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:22555812..22555979
RNA-Seq ExpressionIVF0005778
SyntenyIVF0005778
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055382.1 retrotransposon protein [Cucumis melo var. makuwa]3.68e-29100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-2896.3Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRN
        MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFTEWQLRN
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRN
TYJ99309.1 retrotransposon protein [Cucumis melo var. makuwa]3.68e-29100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2994.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCD+VDD+DEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]6.20e-2892.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFT+WQLRN+
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
TrEMBL top hitse value%identityAlignment
A0A5A7UF58 Retrotransposon protein1.4e-2094.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCD+VDD+DEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
A0A5A7UHS6 Retrotransposon protein8.9e-23100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
A0A5A7V4Q8 Retrotransposon protein8.3e-2196.3Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRN
        MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFTEWQLRN
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRN
A0A5D3BK44 Retrotransposon protein8.9e-23100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
A0A5D3BYY4 Retrotransposon protein1.4e-2094.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
        MTYCD+VDD+DEGDSTYATTTASEDIQYIETTNE SQWRDDLAESMFTEWQLRNT
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGATGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGTTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGATGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGTTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACACTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNECSQWRDDLAESMFTEWQLRNT