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IVF0005783 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005783
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S acidic ribosomal protein P3
Genome locationchr05:20388575..20389881
RNA-Seq ExpressionIVF0005783
SyntenyIVF0005783
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]4.02e-6795.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]1.79e-72100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLFD
        KKEEVKEESDDEDLGLSLFD
Subjt:  KKEEVKEESDDEDLGLSLFD

XP_022153281.1 60S acidic ribosomal protein P3-2 [Momordica charantia]1.83e-5686.07Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG--AAAAPAGGDAPAAAEAP
        MGVFTFVCRSSG +WTA QYSGDLEGSA STYELQRKLVQ+AL+VDSSGGVQSSFS+I+PTSAVFQVI+GGGGGGGFI GG  AAAAP+GG APAA EAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG--AAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEE KEESDD DLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]1.29e-6388.43Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG-AAAAPAGGDAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFIGGG AAAAPAGGDAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG-AAAAPAGGDAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]1.84e-7098.36Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG--AAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG  AAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG--AAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein2.2e-5095.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPA
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-21.9e-54100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLFD
        KKEEVKEESDDEDLGLSLFD
Subjt:  KKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-21.9e-54100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLFD
        KKEEVKEESDDEDLGLSLFD
Subjt:  KKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like1.0e-4788.43Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI-GGGAAAAPAGGDAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFI GGGAAAAPAGGDAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI-GGGAAAAPAGGDAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like1.0e-4788.43Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI-GGGAAAAPAGGDAPAAAEAPA
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFI GGGAAAAPAGGDAPAAAEAPA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI-GGGAAAAPAGGDAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P36.0e-2960.16Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI---GGGAAAAPAGGDAPAAAEA
        MGV+TFVCR++GG+WTA Q+SG++E SA + YELQR+LV +A + DS  GVQSSFS +TP+SAVFQVIVG  GGG  +   GGG  AA +GG   AAAEA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI---GGGAAAAPAGGDAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P52855 60S acidic ribosomal protein P13.9e-0467.31Show/hide
Query:  VGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
        VG GGG   +   AAAAPAGG A AAA A  EKKEE KEESDD D+G SLFD
Subjt:  VGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P32.4e-3065Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGV+TFVCRSSG +WTA Q  G+LE SA + YELQR+LV +A + DS+ GVQSSFS ++P+SAVFQVI+G  GGG  IGGGAAA  A G A A A    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLFD
        KKEE KEES+D DLG SLFD
Subjt:  KKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-23.1e-3363.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GG AAA  GG   AAA    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLF
        +K++ + E ++ D G  LF
Subjt:  KKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-11.7e-3165.55Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++PTSAVFQVIVGGGGGGGF  GGAA++  G    AAA    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLF
        KK+E  EE ++ D G  LF
Subjt:  KKEEVKEESDDEDLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family1.2e-3265.55Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++PTSAVFQVIVGGGGGGGF  GGAA++  G    AAA    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLF
        KK+E  EE ++ D G  LF
Subjt:  KKEEVKEESDDEDLGLSLF

AT5G57290.1 60S acidic ribosomal protein family2.2e-3463.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GG AAA  GG   AAA    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLF
        +K++ + E ++ D G  LF
Subjt:  KKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family6.2e-2975.31Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GG
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGG

AT5G57290.3 60S acidic ribosomal protein family4.1e-3363.87Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GG AAA  GG   AAA    E
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAE

Query:  KKEEVKEESDDEDLGLSLF
        +K++ + E ++ D G  LF
Subjt:  KKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCCGACTCCACCTACGAGCTCCAGAGGAA
ACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCTTTCTCCTTCATTACTCCTACCTCCGCCGTTTTCCAGGTGATTGTTGGCGGTGGAGGTG
GTGGTGGTTTCATAGGCGGTGGGGCTGCAGCTGCCCCTGCTGGAGGTGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGCGAT
GATGAAGACCTTGGCCTATCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
AGGGTTTCATCCGCCAACATAAAAACCAAACACAATCCGTAGGAGAGAGCCGTCCACTCCATACTCACTCCCTAATTCTCTTCAACCCAAATCTCCATTCCAACATCAAA
CCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCCGACTCCACCTACGAGCTCC
AGAGGAAACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCTTTCTCCTTCATTACTCCTACCTCCGCCGTTTTCCAGGTGATTGTTGGCGGT
GGAGGTGGTGGTGGTTTCATAGGCGGTGGGGCTGCAGCTGCCCCTGCTGGAGGTGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGA
GAGCGATGATGAAGACCTTGGCCTATCACTTTTTGATTAGTTTGGTATTAATTACTTGTTATTGTTTTTATCAAACCTCAGAGTTTGTAGCACTCAGGTTTTCTTTTCTG
GAAATTATGTCTATGCATTTACTTGAATTTGCAAGTTCAGTTGATGTTCTTGTTTAAGGACGTAAATTTTGTTACTGACCCTTGTCAAATGGTTGAGAATTAGATATGTT
ATTTTGTTATTTCGTTTGGGAAGTTA
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESD
DEDLGLSLFD