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IVF0005798 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005798
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchr08:1826772..1829407
RNA-Seq ExpressionIVF0005798
SyntenyIVF0005798
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052677.1 squamosa promoter-binding protein 1 [Cucumis melo var. makuwa]3.85e-67100Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]4.97e-8790.14Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]1.08e-97100Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]5.99e-6369.72Show/hide
Query:  MANSNDHSWEDMILDDDDDDD-NDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS D  W D + +++++++ +D +EVGFV++ER++R+ +++ R G GGGR++VARCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSNDHSWEDMILDDDDDDD-NDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST
        QCSRFH+VSEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]5.13e-8085.21Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NS D  WEDM++++DDD+D D EE+GFV++ERRRRS LT GRGG GGGR TVARCQADGCNADL+ ARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein3.4e-6690.14Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN

A0A1S3AZN8 squamosa promoter-binding protein 12.6e-74100Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN

A0A5A7UDV9 Squamosa promoter-binding protein 12.6e-50100Show/hide
Query:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

A0A6J1EFR3 Squamosa promoter-binding-like protein3.3e-4566.67Show/hide
Query:  MANSNDHSWEDMI---LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S D  W + +    ++++++D+D +E+GFV +ER++R+  +  R G GGGR++V RCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSNDHSWEDMI---LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST
        CQQCSRFH+VSEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  CQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein7.1e-4869.72Show/hide
Query:  MANSNDHSWEDMI-LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS D  W D +  ++++++++D +EVGFV++ER++R+ +++ R G GGGR++VARCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSNDHSWEDMI-LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST
        QCSRFH+VSEFD+TKRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 101.6e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK
        G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK

Q0DAE8 Squamosa promoter-binding-like protein 101.6e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK
        G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK

Q2R3Y1 Putative squamosa promoter-binding-like protein 191.6e-2867.05Show/hide
Query:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK
        G GGGGGG      C  DGC +DL+  R YHRRHKVCE HAK  VV++AG EQRFCQQCSRFH ++EFDD K+SCR RL GHN RRRK
Subjt:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK

Q38741 Squamosa promoter-binding protein 12.7e-2852.85Show/hide
Query:  LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDT
        L    +   + +++G  ++ ++ R+   +G+   G   ST   CQ + C A++T A+PYHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFD+ 
Subjt:  LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDT

Query:  KRSCRSRLAGHNERRRKILPDFH
        KRSCR RLAGHNERRRK   D H
Subjt:  KRSCRSRLAGHNERRRKILPDFH

Q8GXL3 Squamosa promoter-binding-like protein 81.0e-2769.32Show/hide
Query:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK
        G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD+ KRSCR RLA HN RRRK
Subjt:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 87.3e-2969.32Show/hide
Query:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK
        G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD+ KRSCR RLA HN RRRK
Subjt:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 42.8e-2857.02Show/hide
Query:  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRS
        ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRS
Subjt:  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRS

Query:  CRSRLAGHNERRRK
        CR RLAGHNERRRK
Subjt:  CRSRLAGHNERRRK

AT1G53160.2 squamosa promoter binding protein-like 42.8e-2857.02Show/hide
Query:  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRS
        ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRS
Subjt:  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRS

Query:  CRSRLAGHNERRRK
        CR RLAGHNERRRK
Subjt:  CRSRLAGHNERRRK

AT2G42200.1 squamosa promoter binding protein-like 91.8e-2762.22Show/hide
Query:  RGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILP
        RGGG G    + RCQ +GC  DLT A+ Y+ RH+VC  H+K   V +AG+EQRFCQQCSRFH + EFD  KRSCR RLAGHNERRRK  P
Subjt:  RGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILP

AT3G60030.1 squamosa promoter-binding protein-like 122.1e-2858.95Show/hide
Query:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST
        GGG  S    CQ D C ADL+  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFD+ KRSCR RLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAG
ATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACC
GCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCGGAATTC
GATGACACAAAGAGAAGCTGCCGGAGTCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCATTCACTTTCGTTTCCATTATAGTTTATATTATATATATAGTCATGTGGTTCTTCTAATTTGTTCTATACATATAAGACTTCTCTTAGGAAAATGGCAAACTCAA
ACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACC
ACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGT
CTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCGGAATTCGATGACACAAAGA
GAAGCTGCCGGAGTCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGAACCACACAACACTCCTCACTGTGT
CCACTAATTACCATAATTAATAATAATAAATAACAATAATGATACACTCATTACTAATGAAGAAGAAGATCAAGAAAGAATGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
AAAGAAAGAGCTACGCGTCATTGGAGTTAATTTTGTTTTGAGAGAGAGTCACCGGCGGTCCGGCCACCGCGATGAAAAAATGAACTGTTATGCTTCCTCTCTTCTGTCAT
CAAAAGAAAACCCAATTTATAGCCCTCTTTGTAATATAATTTGAAGTTGTCTCTTCATTATTAGACCAAAACTTTTCATTATATTTACTTAAGTTACACTATATATATTA
TTATATCTCTATCCACCACTCCTTGTATATTTATATAAACACAGAAATGGTTATTAGCCTATAAAATAAC
Protein sequenceShow/hide protein sequence
MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF
DDTKRSCRSRLAGHNERRRKILPDFHGQSSTN