; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005834 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005834
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationchr06:22151596..22154133
RNA-Seq ExpressionIVF0005834
SyntenyIVF0005834
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]1.68e-63100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]5.96e-5997.89Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]8.02e-6297Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

XP_023895256.1 small ubiquitin-related modifier 1 [Quercus suber]1.71e-5896.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD++SIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]2.39e-6399Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA+I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier1.7e-48100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

A0A1S3BKS1 Small ubiquitin-related modifier1.7e-48100Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

A0A2I4DY72 Small ubiquitin-related modifier6.8e-4595.92Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA

A0A6A1VQH5 Small ubiquitin-related modifier6.8e-4595.92Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA

A0A6J1DX09 Small ubiquitin-related modifier3.2e-4797Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt32.4e-2356.38Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +G T+Q++ K  T+   HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 16.1e-4392.39Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG

P55857 Small ubiquitin-related modifier 11.6e-3887.91Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 37.3e-2053.93Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 21.5e-4195.51Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 14.3e-4492.39Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG

AT5G55160.1 small ubiquitin-like modifier 21.1e-4295.51Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG

AT5G55160.2 small ubiquitin-like modifier 26.5e-4083.33Show/hide
Query:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG

Query:  GG
        GG
Subjt:  GG

AT5G55170.1 small ubiquitin-like modifier 35.2e-2153.93Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein3.3e-2052.33Show/hide
Query:  DKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED DEI+A   Q GG
Subjt:  DKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGA
CTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAA
mRNA sequenceShow/hide mRNA sequence
CATATAGTGCATAACCGAGGCCAAAACAGCACTTCCAGATTTTCCCAACCCTTCTTCTTTACATACAAAGATCAAACAAACCCCACCAAAAATTTTCCCTTCTTCCAACT
TCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCC
GGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCA
GAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAATCTCGGAGACAAAAT
AGTTCCTCAAACATCATTTGCAATCCTATAATTTTCTTGCTACTGCTAGTATATGCCTGAACTTCTGCTGCTGGATGTTGCTTCTGTCTATATAAATTATGACTACGATT
TCTGCGTCTTCCAGTTCTCTAGAAGTGAAAGAGACAATGTCGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTGCTCCTATTTCATTTTTCTGACTACATCCT
GAAGTTACAATGTGATTATGTTTGGCTTGTGTATCTTTGTTCCTGGGACATGAAACTTTCAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCAT
ATGTGCATCTCAACTAATCTTACGGAACAATCGCCTGATCCTACGATATTTGGTTATCAAAGAAACACTTAAGATATCAAACTTTAGGTAGTGGCTACTAAAAGGAGCTT
TAGAGTATAACACAAGGTTTTACCAAGAAGGCTTAGATCGGCCATGTGCGTACTGTACTCAAAGCTCGGGAAGCTAATAAGCATATTGTTTCTCTATTCAAGATGGGACA
TTTTTTTCAAAGCAGTACAAGGTATAAACACTTTCTAAAAAGTCCCAAAATCAAGAAGAAAAGAAAGTTTTGGTGTGGACTGCAGGTAAGTTGTTATCTGTCTCATAATG
AATCTGAAAACGGGTACTACTTTGTTTTAATGAATAAAAAACTGAAAAATATTGATCAAGAAAGCACTTTGCTTTGGTATTTGAATCACAAAAGGTAATATTCTTTCTTT
AGAGGCAGGTTGTTTGCTGGAGAAGCACAGAACCTTCTTCAACATGTGAAACTCGTGTTTGTTTGAAGATCTTGTTTTGTTTACTCGTTGTTCTTTTGACCATAGGTACA
GACTTACAGTAG
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII