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IVF0005853 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005853
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionthioredoxin-like protein HCF164, chloroplastic
Genome locationchr12:14570908..14571699
RNA-Seq ExpressionIVF0005853
SyntenyIVF0005853
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044241 - Thiol:disulfide interchange protein TxlA/HCF164


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12934.1 thioredoxin-like protein [Cucumis melo var. makuwa]8.24e-6372.73Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
XP_008440187.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo]1.32e-6170Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
XP_008440188.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis melo]2.01e-6272.73Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
XP_016899239.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucumis melo]1.93e-6170Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
XP_016899240.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo]7.31e-6270Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
TrEMBL top hitse value%identityAlignment
A0A1S3B047 thioredoxin-like protein HCF164, chloroplastic isoform X31.8e-4870Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
A0A1S3B0J9 thioredoxin-like protein HCF164, chloroplastic isoform X23.6e-4972.73Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
A0A1S4DTC4 thioredoxin-like protein HCF164, chloroplastic isoform X11.8e-4870Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
A0A1S4DU52 thioredoxin-like protein HCF164, chloroplastic isoform X41.8e-4870Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                               K   V
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------------KAHYV

Query:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        EFYADWCEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  EFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
A0A5D3CPH8 Thioredoxin-like protein3.6e-4972.73Show/hide
Query:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW
        LPESHDT  APEKSSDGPESA DT GQAASSSSNQGF +FPNKDI RRIAIISTVS LALFSSS                         K   VEFYADW
Subjt:  LPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVEFYADW

Query:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        CEVC ELAPD YKVEQQF   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  CEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
SwissProt top hitse value%identityAlignment
O23166 Thioredoxin-like protein HCF164, chloroplastic5.0e-3250.93Show/hide
Query:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVE
        PES +T      I   E SS   E    +    +SSSS+ GF + PNKDI RR+A ++ ++ L+LF S+                         K   VE
Subjt:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVE

Query:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLFR
        FYADWCEVC ELAPD YK+EQQ+   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL R
Subjt:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLFR
P35088 Thiol:disulfide interchange protein TxlA2.7e-0944.26Show/hide
Query:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        +EFYADWC  C  +A     ++Q +   D ++FVMLN+DN KW  E+ ++ V+GIP F +L
Subjt:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
P73920 Thiol:disulfide interchange protein TxlA homolog2.2e-1150.82Show/hide
Query:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        VEFYADWC  C  +APD  ++++ +     VNF MLNVDN KW  E+  + V+GIPHF +L
Subjt:  VEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic6.6e-3252.38Show/hide
Query:  EKSSDGPESADDTI---GQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL----------------------KAHYVEFYADWCEVCMEL
        E  +D P + DD+     +A+S+S + G   FPNKD+ RRIA+ ST+  + LF+                            K   VEFYADWCEVC EL
Subjt:  EKSSDGPESADDTI---GQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL----------------------KAHYVEFYADWCEVCMEL

Query:  APDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
        APD YKVEQQ+   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Subjt:  APDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFL
Arabidopsis top hitse value%identityAlignment
AT4G37200.1 Thioredoxin superfamily protein3.6e-3350.93Show/hide
Query:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVE
        PES +T      I   E SS   E    +    +SSSS+ GF + PNKDI RR+A ++ ++ L+LF S+                         K   VE
Subjt:  PESHDT------IFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKL---------------------KAHYVE

Query:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLFR
        FYADWCEVC ELAPD YK+EQQ+   D VNFVMLNVDNTKWEQELDEFGVEGIPHFAFL R
Subjt:  FYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCCGAATCGCACGACACCATCTTTGCTCCGGAAAAATCATCGGACGGTCCTGAATCAGCCGATGACACCATTGGCCAAGCCGCTAGTTCTTCAAGTAATCAAGG
TTTTCTTCAGTTTCCCAATAAAGATATCATTAGACGAATTGCAATCATTTCTACTGTTTCGGAACTGGCACTTTTCTCCTCAAGCTCTTTCAAATTGAAAGCTCACTATG
TGGAGTTCTATGCAGATTGGTGTGAAGTTTGTATGGAATTGGCTCCAGATGCATACAAAGTTGAGCAACAGTTTGTGGAAATGGACCATGTGAATTTTGTAATGCTTAAT
GTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTATTTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCCGAATCGCACGACACCATCTTTGCTCCGGAAAAATCATCGGACGGTCCTGAATCAGCCGATGACACCATTGGCCAAGCCGCTAGTTCTTCAAGTAATCAAGG
TTTTCTTCAGTTTCCCAATAAAGATATCATTAGACGAATTGCAATCATTTCTACTGTTTCGGAACTGGCACTTTTCTCCTCAAGCTCTTTCAAATTGAAAGCTCACTATG
TGGAGTTCTATGCAGATTGGTGTGAAGTTTGTATGGAATTGGCTCCAGATGCATACAAAGTTGAGCAACAGTTTGTGGAAATGGACCATGTGAATTTTGTAATGCTTAAT
GTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTATTTAGGTAA
Protein sequenceShow/hide protein sequence
MLPESHDTIFAPEKSSDGPESADDTIGQAASSSSNQGFLQFPNKDIIRRIAIISTVSELALFSSSSFKLKAHYVEFYADWCEVCMELAPDAYKVEQQFVEMDHVNFVMLN
VDNTKWEQELDEFGVEGIPHFAFLFR