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IVF0005869 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005869
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:20442633..20442800
RNA-Seq ExpressionIVF0005869
SyntenyIVF0005869
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]1.47e-2892.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDVEDEDEGDSTYATTT SEDIQYIETTNEWSQW DDLA SMFTDWQ RNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
KAA0041029.1 retrotransposon protein [Cucumis melo var. makuwa]1.78e-2792.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDVEDEDEGDSTYATTT SEDIQYIETTNEWSQW DDLA SMFTDWQ RNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]3.07e-2890.91Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDD++DEDEGDSTYATTT SEDIQYIETTNEWSQW DDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
KAA0068154.1 retrotransposon protein [Cucumis melo var. makuwa]7.59e-29100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]6.20e-2890.91Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYC+DV+DEDEGDSTYATTT SEDIQYIETTNEWSQW DDLAESMFTDWQLRN+
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein7.5e-2294.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDV+DEDEGDSTYATTT SEDIQYIETTNEWSQWHDDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
A0A5A7TUU4 Retrotransposon protein9.9e-2296.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDVEDEDEGDSTYATTT SEDIQYIETTNEWSQW DDLAESMFTDWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
A0A5A7USE5 Retrotransposon protein2.2e-2192.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDV+DEDEGDSTYATTT SEDIQYIETTNEWSQWHDDL ESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
A0A5A7VL61 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
A0A5D3CHC3 Retrotransposon protein9.9e-2294.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
        MTYC+DVEDEDEGDSTYATTT SEDIQYIETTNEWSQWHDDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCACGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCACGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDEGDSTYATTTTSEDIQYIETTNEWSQWHDDLAESMFTDWQLRNA