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IVF0005874 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005874
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:16099272..16099439
RNA-Seq ExpressionIVF0005874
SyntenyIVF0005874
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035913.1 retrotransposon protein [Cucumis melo var. makuwa]6.74e-29100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]2.54e-2992.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL  SMFT+WQ RNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]5.32e-2992.73Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYC+DV+DEDEGDSTY TTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]4.57e-3094.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDD++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2990.91Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCD+V+D+DEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRN 
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SZ61 Retrotransposon protein6.8e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
A0A5A7TUU4 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFT+WQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
A0A5A7UG16 Retrotransposon protein2.0e-2298.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
A0A5A7V4C6 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDDVED+DEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein5.8e-2294.55Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
        MTYCDD++DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDL ESMFTEWQLRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGTCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGTCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLVESMFTEWQLRNA