; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005909 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005909
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationchr06:241707..242117
RNA-Seq ExpressionIVF0005909
SyntenyIVF0005909
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022669 - Ribosomal protein L2, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033644.1 ribosomal protein L2 [Cucumis melo var. makuwa]1.34e-95100Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
        GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI

KAA0064006.1 ribosomal protein L2 [Cucumis melo var. makuwa]4.50e-8190.44Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGSQCWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
        GEGRAPIGRKKPAT WGYPALGMEEEVEKGINIVRI
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI

TYK08770.1 ribosomal protein L2 [Cucumis melo var. makuwa]2.03e-7187.7Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

WP_206639732.1 50S ribosomal protein L2 [Vibrio vulnificus]2.88e-7186.89Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS T+GQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

YP_009263176.1 ribosomal protein L2 [Atuna racemosa]1.01e-7187.7Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKP T WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

TrEMBL top hitse value%identityAlignment
A0A346TM17 50S ribosomal protein L2, chloroplastic4.4e-5588.52Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGTTIHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

A0A346TM18 50S ribosomal protein L2, chloroplastic4.4e-5588.52Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGTTIHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

A0A5A7VC43 Ribosomal protein L2 (Chloroplast)1.5e-6390.44Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGSQCWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
        GEGRAPIGRKKPAT WGYPALGMEEEVEKGINIVRI
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI

A0A5D3DHA1 Ribosomal protein L2 (Chloroplast)8.0e-73100Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
        GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEKGINIVRI

A0A6H0E859 Ribosomal protein L29.8e-5587.7Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQV N GVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

SwissProt top hitse value%identityAlignment
A4QJF6 50S ribosomal protein L2, chloroplastic1.0e-5682.95Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV N GVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEK
        GEGRAPIGRKKPAT WGYPALG      K
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEK

A4QJP0 50S ribosomal protein L2, chloroplastic1.0e-5682.95Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV N GVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEK
        GEGRAPIGRKKPAT WGYPALG      K
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEK

Q14F95 50S ribosomal protein L2-A, chloroplastic1.0e-5686.89Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

Q14FB6 50S ribosomal protein L2-B, chloroplastic1.0e-5686.89Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

Q4VZK5 50S ribosomal protein L2, chloroplastic4.5e-5787.7Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV NAGVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALG
        GEGRAPIGRKKPAT WGYPALG
Subjt:  GEGRAPIGRKKPATLWGYPALG

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family2.8e-2242.06Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEK-SATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG   K + +  K     KLP G+ + I+  C  T+G V N     K L +AG   WLG    V+GV MNP DHPHG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEK-SATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPATL---WGYPALG
        GGEG++     +  T    WG P  G
Subjt:  GGEGRAPIGRKKPATL---WGYPALG

AT2G44065.2 Ribosomal protein L2 family2.8e-2242.06Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEK-SATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG   K + +  K     KLP G+ + I+  C  T+G V N     K L +AG   WLG    V+GV MNP DHPHG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEK-SATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPATL---WGYPALG
        GGEG++     +  T    WG P  G
Subjt:  GGEGRAPIGRKKPATL---WGYPALG

AT3G51190.1 Ribosomal protein L2 family9.8e-1540.18Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGS---------QCWLGKHLVVKGV
        +P G  I N+E+ +G  G LARA+G  AIV     E  +   KLP G  +++   C   +GQV   G  +K L +AG+          CW     VV+GV
Subjt:  MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGS---------QCWLGKHLVVKGV

Query:  VMNPVDHPHGGG
         MNPV+HPHGGG
Subjt:  VMNPVDHPHGGG

ATCG00830.1 ribosomal protein L24.6e-5781.4Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV N GVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEK
        GEGRAPIGRKKP T WGYPALG      K
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEK

ATCG01310.1 ribosomal protein L24.6e-5781.4Show/hide
Query:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG
        MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQV N GVNQKSLGRAGS+CWLGK  VV+GVVMNPVDHPHGG
Subjt:  MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGG

Query:  GEGRAPIGRKKPATLWGYPALGMEEEVEK
        GEGRAPIGRKKP T WGYPALG      K
Subjt:  GEGRAPIGRKKPATLWGYPALGMEEEVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATC
GGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAG
CCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTCGGAAA
AAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAATGGAAGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATC
GGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAG
CCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTCGGAAA
AAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAATGGAAGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA
Protein sequenceShow/hide protein sequence
MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKGVVMNPVDHPHGGGEGRAPIGRK
KPATLWGYPALGMEEEVEKGINIVRI