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IVF0005915 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005915
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAlba domain-containing protein
Genome locationchr05:25616555..25618463
RNA-Seq ExpressionIVF0005915
SyntenyIVF0005915
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]5.45e-5374.47Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSAL           +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]1.34e-5375.18Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSAL           +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

XP_022946216.1 uncharacterized protein At2g34160-like [Cucurbita moschata]2.01e-4870.21Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSAL           +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEER E GDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

XP_023547053.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]7.02e-4970.92Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGV+SINL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSAL           +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEER E GDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

XP_038890892.1 uncharacterized protein At2g34160-like [Benincasa hispida]9.42e-5071.53Show/hide
Query:  MEEIVEGVNSINLSSDSF---KKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIK
        MEEIVEGVNS+NLSSDS+   KKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSAL           +IATVVTV    +    L    +    TVDIK
Subjt:  MEEIVEGVNSINLSSDSF---KKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIK

Query:  DDSRGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        DDSRGRP     IEILLGKT+NFDELMAAAAEERGEIGDADEQS
Subjt:  DDSRGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like8.1e-4175.18Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSA         L  +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein8.1e-4175.18Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSA         L  +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like1.2e-3668.79Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSA         L  +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1G312 uncharacterized protein At2g34160-like7.1e-3770.21Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSA         L  +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEILLGKTENFDELMAAAAEER E GDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like2.1e-3669.5Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSA         L  +IATVVTV    +    L    +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEI LGKTENFDELMAAAAEER E GDADEQS
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.0e-2859.54Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEI +GVN++NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+++VELSA         L  +IATVVTV    +         +    TVDIKDD+
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEER
        RGRP     IEI L K+E FDELMAAA EE+
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEER

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein3.7e-3058.87Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEI EGVN++NL+ D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSA         L  +IATVVTV    +         +    TVDIKDDS
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS
        RGRP     IEI L K+E FDELMAAA EE+ E  +A EQ+
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEERGEIGDADEQS

AT2G34160.1 Alba DNA/RNA-binding protein1.4e-2959.54Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS
        MEEI +GVN++NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+++VELSA         L  +IATVVTV    +         +    TVDIKDD+
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDS

Query:  RGRP-----IEILLGKTENFDELMAAAAEER
        RGRP     IEI L K+E FDELMAAA EE+
Subjt:  RGRP-----IEILLGKTENFDELMAAAAEER

AT3G04620.1 Alba DNA/RNA-binding protein1.9e-1849.54Show/hide
Query:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDSRGR-----PIEILLG
        ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQH+EVELSA         L  +I TVVT++   +    L    +    TV +KD+++G+      IEI+LG
Subjt:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDSRGR-----PIEILLG

Query:  KTENFDELM
        K++ FD L+
Subjt:  KTENFDELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTTGAAGGCGTCAATTCCATCAACTTGAGTTCCGATTCCTTTAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAACCCTTGTTCTTCTAT
GTCAATCTCGCTAAGAGGTACATGCAGCAGCATGATGAGGTTGAACTTTCTGCTCTGGAATGGGTAATTTGCTGCTTTATGCTTTCGTTTTCAATTGCCACAGTT
GTTACAGTTAATGTTTATTGTGTTCCTTTTACTAACTTGCATCAAATTTACAGAGATTGCAACCTCACTGTTGATATCAAGGATGACTCAAGAGGAAGACCTATT
GAGATATTGCTGGGTAAAACTGAAAACTTCGATGAATTGATGGCTGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGACGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAATTGTTGAAGGCGTCAATTCCATCAACTTGAGTTCCGATTCCTTTAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAACCCTTGTTCTTCTAT
GTCAATCTCGCTAAGAGGTACATGCAGCAGCATGATGAGGTTGAACTTTCTGCTCTGGAATGGGTAATTTGCTGCTTTATGCTTTCGTTTTCAATTGCCACAGTT
GTTACAGTTAATGTTTATTGTGTTCCTTTTACTAACTTGCATCAAATTTACAGAGATTGCAACCTCACTGTTGATATCAAGGATGACTCAAGAGGAAGACCTATT
GAGATATTGCTGGGTAAAACTGAAAACTTCGATGAATTGATGGCTGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGACGAGCAGAGTTAA
Protein sequenceShow/hide protein sequence
MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALEWVICCFMLSFSIATVVTVNVYCVPFTNLHQIYRDCNLTVDIKDDSRGRPI
EILLGKTENFDELMAAAAEERGEIGDADEQS