; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005926 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005926
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionE3 ubiquitin-protein ligase ATL42-like
Genome locationchr02:16470881..16471345
RNA-Seq ExpressionIVF0005926
SyntenyIVF0005926
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046520.1 E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa]1.92e-85100Show/hide
Query:  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA
        EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA
Subjt:  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA

Query:  IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
Subjt:  IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

KAE8647036.1 hypothetical protein Csa_023000 [Cucumis sativus]4.83e-7589.03Show/hide
Query:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG
        FLNTEMLG MSS+RFSSL+SESI +SATRE+EGK+TSQIKE MEMKRSFERRISIAEKNSLVSISGISSTS D NASTS+TT LNER SVSDTTAFSRFG
Subjt:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG

Query:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        YFNENA RDSSMIEADAKS+RIRQLWLPIARRTVQWFANRE+R RLSKYTQQPDA
Subjt:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

XP_008462696.1 PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo]9.14e-8698.03Show/hide
Query:  LNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN
        +  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN
Subjt:  LNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN

Query:  ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
Subjt:  ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

XP_031738779.1 putative RING-H2 finger protein ATL12 [Cucumis sativus]3.10e-7589.68Show/hide
Query:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG
        FLNTEMLG MSS+RFSSL+SESI +SATRE+EGK+TSQIKE MEMKRSFERRISIAEKNSLVSISGISSTS DSNASTS+TT LNER SVSDTTAFSRFG
Subjt:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG

Query:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        YFNENA RDSSMIEADAKS+RIRQLWLPIARRTVQWFANRE+R RLSKYTQQPDA
Subjt:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

XP_031742649.1 E3 ubiquitin-protein ligase ATL42-like, partial [Cucumis sativus]1.26e-7489.03Show/hide
Query:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG
        FLNTEMLG MSS+RFSSL+SESI +SATRE+EGK+TSQIKE MEMKRSFERRISIAEKNSLVSISGISSTS D NASTS+TT LNER SVSDTTAFSRFG
Subjt:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTS-DSNASTSKTTNLNER-SVSDTTAFSRFG

Query:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        YFNENA RDSSMIEADAKS+RIRQLWLPIARRTVQWFANRE+R RLSKYTQQPDA
Subjt:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

TrEMBL top hitse value%identityAlignment
A0A1S3CHH4 E3 ubiquitin-protein ligase ATL42-like1.8e-6898.03Show/hide
Query:  LNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN
        +  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN
Subjt:  LNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFN

Query:  ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
Subjt:  ENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

A0A5D3DZA7 E3 ubiquitin-protein ligase ATL42-like1.8e-68100Show/hide
Query:  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA
        EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA
Subjt:  EMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENA

Query:  IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
        IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA
Subjt:  IRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA

A0A6J1CUV0 E3 ubiquitin-protein ligase ATL42-like1.8e-5277.27Show/hide
Query:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNE-RSVSDTTAFSRFG
        MFLNTEMLGAMSS+RFSSL++++IRRS T E E KR S IKE MEMKRSFE RISIAEKN+L+SI+G+ S SDSNASTS+T NLNE RSVSDTTAFSRFG
Subjt:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNE-RSVSDTTAFSRFG

Query:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD
         FNENAIR++S+IE++A+ YRIR++WLPIARRTVQWFANRE R++LSKYTQQPD
Subjt:  YFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD

A0A6P5ZGR3 E3 ubiquitin-protein ligase ATL42-like isoform X21.2e-2450.64Show/hide
Query:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNL----NERSVSDTTAFS
        MFLN+EML  +SS+RFSSLE++ +R + TR  E ++  +IKE ME+KR FER++S   K++ VS  G+ STS+S A++S T+ +     +RS+S+ TA S
Subjt:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNL----NERSVSDTTAFS

Query:  RF-GYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQ
        RF      N + +SS+ E   K  RIR+LWLPIARRTVQWFANRE RS+ S+ T Q
Subjt:  RF-GYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQ

A0A6P5ZH95 E3 ubiquitin-protein ligase ATL42-like isoform X11.2e-2450.64Show/hide
Query:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNL----NERSVSDTTAFS
        MFLN+EML  +SS+RFSSLE++ +R + TR  E ++  +IKE ME+KR FER++S   K++ VS  G+ STS+S A++S T+ +     +RS+S+ TA S
Subjt:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNL----NERSVSDTTAFS

Query:  RF-GYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQ
        RF      N + +SS+ E   K  RIR+LWLPIARRTVQWFANRE RS+ S+ T Q
Subjt:  RF-GYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQ

SwissProt top hitse value%identityAlignment
Q5XF85 E3 ubiquitin-protein ligase ATL421.2e-1036.25Show/hide
Query:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRF--
        MFLN+EM+ ++SS RFSSL  + ++R    ++ G    +IKE ME KR  E +++     S+ ++    +    + S S       RSVSD TA  R   
Subjt:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRF--

Query:  ---GYFNENAIRDSSMIE--ADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD
           G  + +A   +S ++   +    R R+LWLPIAR+T QWFANRE+RS+++   Q  D
Subjt:  ---GYFNENAIRDSSMIE--ADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD

Q9SL78 Putative RING-H2 finger protein ATL121.0e-0432.47Show/hide
Query:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSR----
        FL +EML ++SS RFSS+  + + R   R+         KE MEMK     R+ I  K+S                       + R+VS+ T  SR    
Subjt:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSR----

Query:  -FGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQ
           Y    A    +         R R+LWLPIARRT QWF NRE+ + L+   Q
Subjt:  -FGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQ

Arabidopsis top hitse value%identityAlignment
AT2G20030.1 RING/U-box superfamily protein7.2e-0632.47Show/hide
Query:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSR----
        FL +EML ++SS RFSS+  + + R   R+         KE MEMK     R+ I  K+S                       + R+VS+ T  SR    
Subjt:  FLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSR----

Query:  -FGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQ
           Y    A    +         R R+LWLPIARRT QWF NRE+ + L+   Q
Subjt:  -FGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQ

AT4G28890.1 RING/U-box superfamily protein8.8e-1236.25Show/hide
Query:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRF--
        MFLN+EM+ ++SS RFSSL  + ++R    ++ G    +IKE ME KR  E +++     S+ ++    +    + S S       RSVSD TA  R   
Subjt:  MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRF--

Query:  ---GYFNENAIRDSSMIE--ADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD
           G  + +A   +S ++   +    R R+LWLPIAR+T QWFANRE+RS+++   Q  D
Subjt:  ---GYFNENAIRDSSMIE--ADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGAACACAGAAATGCTTGGGGCCATGTCCAGCAGTAGATTCTCTTCTTTGGAATCAGAAAGCATTCGCCGATCAGCAACAAGAGAAAGAGAGGGCAAAAGGAC
TTCACAAATTAAGGAAGCGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGAATTTCATCTACCTCAGATT
CTAATGCAAGTACATCAAAGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCATTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCT
ATGATTGAAGCTGATGCAAAAAGTTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAAGAAAGGTCTCGACTCTCAAA
GTACACACAGCAGCCAGATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGAACACAGAAATGCTTGGGGCCATGTCCAGCAGTAGATTCTCTTCTTTGGAATCAGAAAGCATTCGCCGATCAGCAACAAGAGAAAGAGAGGGCAAAAGGAC
TTCACAAATTAAGGAAGCGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGAATTTCATCTACCTCAGATT
CTAATGCAAGTACATCAAAGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCATTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCT
ATGATTGAAGCTGATGCAAAAAGTTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAAGAAAGGTCTCGACTCTCAAA
GTACACACAGCAGCCAGATGCATAG
Protein sequenceShow/hide protein sequence
MFLNTEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENAIRDSS
MIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA