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IVF0005935 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005935
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationchr04:23802117..23802461
RNA-Seq ExpressionIVF0005935
SyntenyIVF0005935
Gene Ontology termsGO:0043457 - regulation of cellular respiration (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046504.1 hypothetical protein E6C27_scaffold11823G00040 [Cucumis melo var. makuwa]2.55e-3579.17Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG
        +KV +WCNPLGDPTSQLPCALRVY PVNSHT QTPW VFQDGSNGEPT RCQER +VE CQKA  A+H+ DG
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG

KAA0050484.1 uncharacterized protein E6C27_scaffold175G001040 [Cucumis melo var. makuwa]8.74e-3277.46Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD
        +KVG+WCNPLGDP SQLPC LRVYSPVNSHT QT W VFQDGSNGEP  RCQER D EA QKA  ASH+ D
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD

PHT97275.1 hypothetical protein BC332_33779 [Capsicum chinense]1.72e-2754.63Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG---QRIHS-----------SMPQVDWRT
        +KVG+ C P GDPT+QLPCALRVYSPV+SHT QTPW VFQDGSNGEPT +  ER D EA ++  + +   +    +RI S           S P+VD RT
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG---QRIHS-----------SMPQVDWRT

Query:  DSSLFHIR
         SS FHIR
Subjt:  DSSLFHIR

TYK04147.1 hypothetical protein E5676_scaffold148G00140 [Cucumis melo var. makuwa]1.02e-84100Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR
        MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR

Query:  GVLVSFFSSAYWYA
        GVLVSFFSSAYWYA
Subjt:  GVLVSFFSSAYWYA

XP_022975619.1 uncharacterized protein LOC111475315 [Cucurbita maxima]1.28e-3278.87Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD
        +KVG+WCNP  DPTSQLPCALRVYSPVNSHT QTPW VFQDGSNGEPT RCQE  D EA QKA  ASH+ D
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD

TrEMBL top hitse value%identityAlignment
A0A2G2VTF2 Regulator of rDNA transcription protein 151.2e-2154.46Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQK---ACVASHNWDGQRI-----------HSSMPQVDWRT
        +KVG+ C P GDPT+QLPCALRVYSPV+SHT QTPW VFQDGSNGEPT +  ER D EA ++     +       +RI           H S P+VD  T
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQK---ACVASHNWDGQRI-----------HSSMPQVDWRT

Query:  DSSLFHIRLEHI
         SSLFHIRL  I
Subjt:  DSSLFHIRLEHI

A0A5A7U5H0 Uncharacterized protein4.4e-2477.46Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD
        +KVG+WCNPLGDP SQLPC LRVYSPVNSHT QT W VFQDGSNGEP  RCQER D EA QKA  ASH+ D
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD

A0A5D3BRY0 Uncharacterized protein1.2e-2679.17Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG
        +KV +WCNPLGDPTSQLPCALRVY PVNSHT QTPW VFQDGSNGEPT RCQER +VE CQKA  A+H+ DG
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDG

A0A5D3BXB2 Uncharacterized protein7.4e-64100Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR
        MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITR

Query:  GVLVSFFSSAYWYA
        GVLVSFFSSAYWYA
Subjt:  GVLVSFFSSAYWYA

A0A6J1IDM8 uncharacterized protein LOC1114753155.2e-2578.87Show/hide
Query:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD
        +KVG+WCNP  DPTSQLPCALRVYSPVNSHT QTPW VFQDGSNGEPT RCQE  D EA QKA  ASH+ D
Subjt:  MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCGGTCAGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTAACTCGCACACACGTCAGACTCCTTGGTG
TGTGTTTCAAGACGGGTCGAATGGGGAGCCTACAAGCCGATGCCAAGAGCGCGTAGATGTCGAAGCCTGCCAGAAGGCATGCGTTGCAAGCCACAATTGGGACGGGCAAC
GTATCCATTCGTCAATGCCCCAAGTCGATTGGCGGACCGACTCGTCACTATTCCACATCCGATTGGAGCACATTACTAGGGGAGTCCTTGTCAGTTTCTTTTCCTCCGCT
TATTGGTATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCGGTCAGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTAACTCGCACACACGTCAGACTCCTTGGTG
TGTGTTTCAAGACGGGTCGAATGGGGAGCCTACAAGCCGATGCCAAGAGCGCGTAGATGTCGAAGCCTGCCAGAAGGCATGCGTTGCAAGCCACAATTGGGACGGGCAAC
GTATCCATTCGTCAATGCCCCAAGTCGATTGGCGGACCGACTCGTCACTATTCCACATCCGATTGGAGCACATTACTAGGGGAGTCCTTGTCAGTTTCTTTTCCTCCGCT
TATTGGTATGCTTAA
Protein sequenceShow/hide protein sequence
MKVGQWCNPLGDPTSQLPCALRVYSPVNSHTRQTPWCVFQDGSNGEPTSRCQERVDVEACQKACVASHNWDGQRIHSSMPQVDWRTDSSLFHIRLEHITRGVLVSFFSSA
YWYA