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IVF0005944 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005944
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr03:14183563..14183799
RNA-Seq ExpressionIVF0005944
SyntenyIVF0005944
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041115.1 hypothetical protein E6C27_scaffold128G00180 [Cucumis melo var. makuwa]1.69e-2359.46Show/hide
Query:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        +RDS+NLID W + K  +KRC HH IL CV  EQFYFGLS+DT+Q  D +FTG MLRS Y+Q+K AL+    NS
Subjt:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]6.73e-3478.21Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        MTFEQRD +NLIDVW RFKR +KRCPHHCI ECVLMEQFYFGLS++T QSA+ +FTG MLRS YNQIKN LD MA NS
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

KAA0049658.1 uncharacterized protein E6C27_scaffold163G001290 [Cucumis melo var. makuwa]6.76e-3684.51Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNAL
        MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTG +   + N+ K +L
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNAL

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]7.40e-2562.82Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        M F+QRD +N+ D W+RFKR VK CP H I ECV ME FYFGLS+DT Q  +T+F G MLRS YNQIK  LD M+ NS
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

TYK21909.1 hypothetical protein E5676_scaffold494G00470 [Cucumis melo var. makuwa]3.56e-2562.16Show/hide
Query:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        +RDS+NLID W + K  +KRC HH IL CVL EQFYFGLS+DTQQ  D +FTG MLRS Y+Q+K AL+    NS
Subjt:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.9e-1862.82Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        M F+QRD +N+ D W+RFKR VK CP H I ECV ME FYFGLS+DT Q  +T+F G MLRS YNQIK  LD M+ NS
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

A0A5A7V1F3 Retrotrans_gag domain-containing protein4.2e-1865.79Show/hide
Query:  FEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        F+QRD KNL D W+ FKR VK C HH I + VLME FYFGLS+DT+QSAD++F G +LRS YNQIK  LD MA NS
Subjt:  FEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

A0A5D3CC26 Uncharacterized protein5.0e-2778.21Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        MTFEQRD +NLIDVW RFKR +KRCPHHCI ECVLMEQFYFGLS++T QSA+ +FTG MLRS YNQIKN LD MA NS
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

A0A5D3D677 Uncharacterized protein3.8e-2784.51Show/hide
Query:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNAL
        MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTG +   + N+ K +L
Subjt:  MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNAL

A0A5D3DEY4 Uncharacterized protein5.5e-1862.16Show/hide
Query:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS
        +RDS+NLID W + K  +KRC HH IL CVL EQFYFGLS+DTQQ  D +FTG MLRS Y+Q+K AL+    NS
Subjt:  QRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCGAGCAACGAGATAGTAAGAATTTAATCGATGTGTGGACGAGATTTAAAAGGAAGGTCAAGAGATGCCCTCACCATTGCATCCTTGAATGCGTTTTGATGGA
GCAGTTCTATTTTGGGCTGAGTGAGGATACACAACAATCTGCTGACACTATGTTTACAGGTATGATGTTGAGATCATTATACAACCAGATCAAGAATGCATTGGATGTTA
TGGCCAGAAATAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCGAGCAACGAGATAGTAAGAATTTAATCGATGTGTGGACGAGATTTAAAAGGAAGGTCAAGAGATGCCCTCACCATTGCATCCTTGAATGCGTTTTGATGGA
GCAGTTCTATTTTGGGCTGAGTGAGGATACACAACAATCTGCTGACACTATGTTTACAGGTATGATGTTGAGATCATTATACAACCAGATCAAGAATGCATTGGATGTTA
TGGCCAGAAATAGTTAG
Protein sequenceShow/hide protein sequence
MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS