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IVF0005945 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005945
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDUF4413 domain-containing protein
Genome locationchr12:6027222..6028076
RNA-Seq ExpressionIVF0005945
SyntenyIVF0005945
Gene Ontology termsGO:0006425 - glutaminyl-tRNA aminoacylation (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004819 - glutamine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44253.1 hypothetical protein Csa_016011 [Cucumis sativus]5.96e-3352.46Show/hide
Query:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY-------------------------------------KHTPIDAKVLK
        ++EKYWSVI+GVLAIAT+LDPRFKMRLIE YF QIY SHY  EI+ V ELC                                      KHTP+DAKVL+
Subjt:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY-------------------------------------KHTPIDAKVLK

Query:  NVLHDRDLNDDEPFPTKVDKIR
        NV HD+D++DDEPFPTK+D+IR
Subjt:  NVLHDRDLNDDEPFPTKVDKIR

TYK23151.1 zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]6.99e-2279.31Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC
        M SRMISKFEKYWSVI+  LAIAT LDP+FKMRLIE YFPQIY SHY  EIK V ELC
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC

XP_023742636.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Lactuca sativa]1.65e-1549.38Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK----HTPIDAKVLKNVLHDRD
        M + MI+KF++YWS+I+GVLAIATILDPRFKM+LIE YFP+IY      E++ + +L Y+    + P DAK  ++ L++ +
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK----HTPIDAKVLKNVLHDRD

XP_030505303.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cannabis sativa]8.49e-1552.11Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY----KHTPIDAK
        M S M+ KFE+YW+ I+G+LAIAT+LDPRFKM+LIE YFP++Y   Y  E++ +  LCY    ++ P D K
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY----KHTPIDAK

XP_038884881.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]3.31e-2177.59Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC
        M SRMI+KFEKYWSVI+GVLAIAT+LDPRFKMRLI+ YFPQIY  H+T EIK V +LC
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC

TrEMBL top hitse value%identityAlignment
A0A0A0K403 DUF4413 domain-containing protein2.1e-2452.46Show/hide
Query:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC-------------------------------------YKHTPIDAKVLK
        ++EKYWSVI+GVLAIAT+LDPRFKMRLIE YF QIY SHY  EI+ V ELC                                      KHTP+DAKVL+
Subjt:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC-------------------------------------YKHTPIDAKVLK

Query:  NVLHDRDLNDDEPFPTKVDKIR
        NV HD+D++DDEPFPTK+D+IR
Subjt:  NVLHDRDLNDDEPFPTKVDKIR

A0A5C7IUL5 BED-type domain-containing protein3.4e-1156.9Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC
        M  +MI  FEKYW VI+GV+A+AT+LDPR+KMRLIE YFP I+ ++Y T ++ + +LC
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC

A0A5D3DHK7 Zinc finger BED domain-containing protein DAYSLEEPER-like7.2e-1779.31Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC
        M SRMISKFEKYWSVI+  LAIAT LDP+FKMRLIE YFPQIY SHY  EIK V ELC
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELC

A0A803PQR9 Uncharacterized protein5.9e-1157.63Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY
        M S M+ KFE+YW+ I+G+LAIAT+LD RFKM LIE YFP+IY   Y  E++ +  LCY
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY

A0A803PTU2 Uncharacterized protein4.1e-1252.11Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY----KHTPIDAK
        M S M+ KFE+YW+ I+G+LAIAT+LDPRFKM+LIE YFP++Y   Y  E++ +  LCY    ++ P D K
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCY----KHTPIDAK

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.0e-0451.28Show/hide
Query:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY
        M  +F+KYW     VLAIA ++DPRFKM+L+E  + +IY
Subjt:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY

P03010 Putative AC9 transposase3.0e-0438.33Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK
        M   M  KFEKYW V    LA+A  LDPR+K  LIE Y  + +   Y   +   + +  K
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK

P08770 Putative AC transposase3.0e-0438.33Show/hide
Query:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK
        M   M  KFEKYW V    LA+A  LDPR+K  LIE Y  + +   Y   +   + +  K
Subjt:  MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYK

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 46.7e-0452.78Show/hide
Query:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY
        KF+KYW     VLAIA  +DPRFKM+++E  + +IY
Subjt:  KFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 23.0e-0438.98Show/hide
Query:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY---RSHYTTEIKHVIELCYK
        M  +F+KYW     VLAIA ++DPRFKM+L+E  + +IY    + Y   +   +   YK
Subjt:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIY---RSHYTTEIKHVIELCYK

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.1e-0444Show/hide
Query:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHV
        M  K +KYW     VLA+A ++DPRFKM+L+E  F +I+       IK V
Subjt:  MISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCAAGAATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTTATGGTGTGTTGGCAATAGCTACAATATTAGATCCTAGATTCAAGATGAGATTGATTGAGTT
GTATTTTCCTCAAATCTATAGATCTCATTATACTACAGAAATTAAACATGTTATAGAATTGTGTTATAAGCATACTCCTATTGATGCTAAAGTGTTGAAAAATGTTCTTC
ACGATCGAGACTTAAACGATGATGAACCATTTCCTACAAAGGTGGATAAAATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCAAGAATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTTATGGTGTGTTGGCAATAGCTACAATATTAGATCCTAGATTCAAGATGAGATTGATTGAGTT
GTATTTTCCTCAAATCTATAGATCTCATTATACTACAGAAATTAAACATGTTATAGAATTGTGTTATAAGCATACTCCTATTGATGCTAAAGTGTTGAAAAATGTTCTTC
ACGATCGAGACTTAAACGATGATGAACCATTTCCTACAAAGGTGGATAAAATTCGTTGA
Protein sequenceShow/hide protein sequence
MVSRMISKFEKYWSVIYGVLAIATILDPRFKMRLIELYFPQIYRSHYTTEIKHVIELCYKHTPIDAKVLKNVLHDRDLNDDEPFPTKVDKIR