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IVF0005960 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005960
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr04:28639649..28639985
RNA-Seq ExpressionIVF0005960
SyntenyIVF0005960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043725.1 hypothetical protein E6C27_scaffold236G00540 [Cucumis melo var. makuwa]1.98e-3192.42Show/hide
Query:  SVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
        +V+  S MMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
Subjt:  SVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
KAG6596233.1 hypothetical protein SDJN03_09413, partial [Cucurbita argyrosperma subsp. sororia]4.36e-0660.78Show/hide
Query:  GIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGV
        GIESS AQFQ   +   LRSS VF+  L+RL  IA L  HFPA AIH RGV
Subjt:  GIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGV
KGN59311.1 hypothetical protein Csa_000870 [Cucumis sativus]3.54e-5095.4Show/hide
Query:  MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
        MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPT+FFRLRSSSVFM SLHRL SIA LPTHFPAAAIHTRGVAARSSG
Subjt:  MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
TrEMBL top hitse value%identityAlignment
A0A0A0LGY9 Uncharacterized protein4.5e-3795.4Show/hide
Query:  MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
        MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPT+FFRLRSSSVFM SLHRL SIA LPTHFPAAAIHTRGVAARSSG
Subjt:  MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
A0A5D3DP90 Uncharacterized protein4.8e-2392.42Show/hide
Query:  SVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
        +V+  S MMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
Subjt:  SVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCAACCCTCAAGGATCGGTTCCAAATAAAAACATCGGCATTTTCTTCCCCAATCTTAGCGTCAGCTGGACTTCAATGATGATGGGAATTGAATCAAGTAACGC
ACAATTTCAGTTTCCAACCGTGTTTTTTCGCCTTCGGTCTTCAAGCGTTTTCATGGCGTCGCTCCATCGGTTACCATCAATCGCTTTGCTACCGACCCATTTTCCAGCTG
CCGCGATCCACACGAGAGGCGTGGCGGCAAGATCATCCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCAACCCTCAAGGATCGGTTCCAAATAAAAACATCGGCATTTTCTTCCCCAATCTTAGCGTCAGCTGGACTTCAATGATGATGGGAATTGAATCAAGTAACGC
ACAATTTCAGTTTCCAACCGTGTTTTTTCGCCTTCGGTCTTCAAGCGTTTTCATGGCGTCGCTCCATCGGTTACCATCAATCGCTTTGCTACCGACCCATTTTCCAGCTG
CCGCGATCCACACGAGAGGCGTGGCGGCAAGATCATCCGGCTAG
Protein sequenceShow/hide protein sequence
MSTNPQGSVPNKNIGIFFPNLSVSWTSMMMGIESSNAQFQFPTVFFRLRSSSVFMASLHRLPSIALLPTHFPAAAIHTRGVAARSSG