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IVF0005969 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005969
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:29948764..29949066
RNA-Seq ExpressionIVF0005969
SyntenyIVF0005969
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035587.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.85e-4981.72Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD I EGNSTTRPP +DGGNYGYWK+ M V LMSLD+RSWRAII  WE+PTEKDE GKVTRKS+LKWTSEEDD AVGNSRALNALFNVVD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

KAA0045046.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]7.44e-67100Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE
        MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE

KAA0045095.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.19e-5388.17Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD IREGNSTTRPP LD GNY YWK+HMV  LMSLDMR WRAIIL WEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

KAA0052057.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.36e-4778.49Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD+IREGNSTTRPP LDGGNYGYWK+ +   LMSLDMR WRAIIL WEH TE DE GK+TRKSKLKWTSEE+DAAVGNS ALNALFN +D N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

KAA0065350.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.02e-4881.72Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD IREGNSTT+PP LDGGNYGYWK  M   LMSLDMR WRAII  WEHPTEKDE GKVTRKS+LKWTSEEDDAAVGNS ALNALFN VD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

TrEMBL top hitse value%identityAlignment
A0A5A7T1U7 Gag-pol polyprotein4.0e-3781.72Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD I EGNSTTRPP +DGGNYGYWK+ M V LMSLD+RSWRAII  WE+PTEKDE GKVTRKS+LKWTSEEDD AVGNSRALNALFNVVD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

A0A5A7TSC7 Gag-proteinase polyprotein1.4e-50100Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE
        MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPE

A0A5A7TUN3 Receptor-like protein 126.6e-4088.17Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD IREGNSTTRPP LD GNY YWK+HMV  LMSLDMR WRAIIL WEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

A0A5A7VDT5 Gag-pol polyprotein3.4e-3681.72Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD IREGNSTT+PP LDGGNYGYWK  M   LMSLDMR WRAII  WEHPTEKDE GKVTRKS+LKWTSEEDDAAVGNS ALNALFN VD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

A0A5A7VGN0 Gag-proteinase polyprotein1.8e-3780.65Show/hide
Query:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM
        MD IREGNSTTRPP LDGGNYGYWK+ M+  LMSLDMRSW+AII  WEHPT+KDE GKVTRKS+LKW SEEDDA VGNSRALN LFNVVD N+
Subjt:  MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGATTCGTGAAGGAAACTCTACTACTAGGCCACCATTTCTGGACGGAGGAAACTATGGATACTGGAAAGCACACATGGTTGTGTTACTTATGTCTCTGGACAT
GAGAAGTTGGAGAGCCATTATTTTAGAATGGGAGCATCCCACTGAAAAGGATGAAATTGGCAAAGTTACTCGAAAATCTAAATTGAAGTGGACAAGTGAAGAAGATGATG
CAGCTGTTGGCAACTCACGTGCATTAAATGCATTGTTTAATGTCGTTGATCATAACATGGGATATCCTGAAGGTTGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGATTCGTGAAGGAAACTCTACTACTAGGCCACCATTTCTGGACGGAGGAAACTATGGATACTGGAAAGCACACATGGTTGTGTTACTTATGTCTCTGGACAT
GAGAAGTTGGAGAGCCATTATTTTAGAATGGGAGCATCCCACTGAAAAGGATGAAATTGGCAAAGTTACTCGAAAATCTAAATTGAAGTGGACAAGTGAAGAAGATGATG
CAGCTGTTGGCAACTCACGTGCATTAAATGCATTGTTTAATGTCGTTGATCATAACATGGGATATCCTGAAGGTTGCTTATGA
Protein sequenceShow/hide protein sequence
MDKIREGNSTTRPPFLDGGNYGYWKAHMVVLLMSLDMRSWRAIILEWEHPTEKDEIGKVTRKSKLKWTSEEDDAAVGNSRALNALFNVVDHNMGYPEGCL