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IVF0005970 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005970
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL39-like
Genome locationchr09:8129170..8129460
RNA-Seq ExpressionIVF0005970
SyntenyIVF0005970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]3.07e-4190.79Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERRMKRAEKL LPPTVKF S+KMVRRRSEEECAICLEEFL GENCQAL EC+ FFHSECIEVWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

KAE8649847.1 hypothetical protein Csa_012715 [Cucumis sativus]1.32e-4288.16Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERR+KRAEKL LPPTV+F S+KMVRRRSEEECAICLEEFL+GENCQAL ECN FFHSECI+VWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]9.68e-4290.79Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERRMKRAEKL LPPTVKF S+KMVRRRSEEECAICLEEFL GENCQAL EC+ FFHSECIEVWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]4.66e-3476.32Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        M EERR++RAEK+  P  V+F S++MVRRRSEEECAICLEEF+ GENCQAL ECN FFHS+CI+VWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]1.37e-4188.16Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERR+KRAEKL LPPTV+F S+KMVRRRSEEECAICLEEFL+GENCQAL ECN FFHSECI+VWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein2.4e-3188.16Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERR+KRAEKL LPPTV+F S+KMVRRRSEEECAICLEEFL+GENCQAL ECN FFHSECI+VWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

A0A1S3BVC7 RING-H2 finger protein ATL39-like1.8e-3190.79Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERRMKRAEKL LPPTVKF S+KMVRRRSEEECAICLEEFL GENCQAL EC+ FFHSECIEVWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

A0A5A7VAT0 RING-H2 finger protein ATL39-like1.8e-3190.79Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERRMKRAEKL LPPTVKF S+KMVRRRSEEECAICLEEFL GENCQAL EC+ FFHSECIEVWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

A0A5D3D9M0 RING-H2 finger protein ATL39-like1.8e-3190.79Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        MAEERRMKRAEKL LPPTVKF S+KMVRRRSEEECAICLEEFL GENCQAL EC+ FFHSECIEVWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

A0A6J1IG67 RING-H2 finger protein ATL39-like2.0e-2576.32Show/hide
Query:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        M EERR++RAEK  +P  V+F S++MVRRRSEEECAICLEEF+ GENCQAL ECN FFHS+CI+VWFSKKFTCPIC
Subjt:  MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

SwissProt top hitse value%identityAlignment
P0C035 RING-H2 finger protein ATL603.0e-0744.19Show/hide
Query:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        ECA+CL + + G+  + L  CN  FH +CI++WF    TCP+C
Subjt:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

Q9LRB7 E3 ubiquitin-protein ligase EL58.0e-0840Show/hide
Query:  SLPPTVKFRSKKMVRRRSEE-------ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        SLP TV  RS      + EE       ECA+CL E   GE  + L  C   FH+EC+++W     TCP+C
Subjt:  SLPPTVKFRSKKMVRRRSEE-------ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

Q9LS99 RING-H2 finger protein ATL771.8e-0747.73Show/hide
Query:  EECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        EEC ICL +F+ GE  + L +CN  FH  CI+ W ++  TCP C
Subjt:  EECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

Q9P7E1 Uncharacterized RING finger protein P4H10.073.0e-0742.55Show/hide
Query:  SEEECAICLEEFLVGENCQALSECNDFFHSECIEVWF-SKKFTCPIC
        ++E C +CL  F + + C+ L +CN FFH ECI+ W  S + +CP+C
Subjt:  SEEECAICLEEFLVGENCQALSECNDFFHSECIEVWF-SKKFTCPIC

Q9XF63 RING-H2 finger protein ATL34.7e-0843.08Show/hide
Query:  KLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        +LS  P V FR       +   EC+ICL E + G+  + L +CN  FH ECI++WF    TCPIC
Subjt:  KLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

Arabidopsis top hitse value%identityAlignment
AT1G32361.1 RING/U-box superfamily protein3.7e-0840Show/hide
Query:  VRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        V+    ++C+ICL EF+  +  + +S CN  FH+ CI++WF    TCP+C
Subjt:  VRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

AT1G35330.1 RING/U-box superfamily protein3.7e-0848.84Show/hide
Query:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        ECAICL EF   E  + +  C+  FH+ CI+VW S + TCP+C
Subjt:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

AT1G53820.1 RING/U-box superfamily protein2.2e-0844.19Show/hide
Query:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        ECA+CL + + G+  + L  CN  FH +CI++WF    TCP+C
Subjt:  ECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

AT1G72310.1 RING/U-box superfamily protein3.3e-0943.08Show/hide
Query:  KLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        +LS  P V FR       +   EC+ICL E + G+  + L +CN  FH ECI++WF    TCPIC
Subjt:  KLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC

AT3G18773.1 RING/U-box superfamily protein1.3e-0847.73Show/hide
Query:  EECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC
        EEC ICL +F+ GE  + L +CN  FH  CI+ W ++  TCP C
Subjt:  EECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGTCGTTGCCGCCGACTGTGAAGTTTAGGAGCAAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGTGCGAT
ATGTTTGGAGGAGTTTTTGGTCGGAGAAAATTGTCAGGCGTTGTCGGAGTGCAATGATTTTTTTCATTCGGAGTGTATTGAAGTTTGGTTTAGCAAGAAATTTACGTGCC
CTATCTGCGTAATTATGTTGCAGCTTAGATTAATTTCTTCTTCCTCCTCTCATTTCTTTTCTCTACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGTCGTTGCCGCCGACTGTGAAGTTTAGGAGCAAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGTGCGAT
ATGTTTGGAGGAGTTTTTGGTCGGAGAAAATTGTCAGGCGTTGTCGGAGTGCAATGATTTTTTTCATTCGGAGTGTATTGAAGTTTGGTTTAGCAAGAAATTTACGTGCC
CTATCTGCGTAATTATGTTGCAGCTTAGATTAATTTCTTCTTCCTCCTCTCATTTCTTTTCTCTACGTTGA
Protein sequenceShow/hide protein sequence
MAEERRMKRAEKLSLPPTVKFRSKKMVRRRSEEECAICLEEFLVGENCQALSECNDFFHSECIEVWFSKKFTCPICVIMLQLRLISSSSSHFFSLR