; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005989 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005989
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease P
Genome locationtig00000084_ERROPOS800000:531866..532339
RNA-Seq ExpressionIVF0005989
SyntenyIVF0005989
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
InterPro domainsIPR031595 - Protein-only RNase P, C-terminal
IPR033495 - Mitochondrial ribonuclease P catalytic subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19841.1 proteinaceous RNase P 1 [Cucumis melo var. makuwa]1.22e-7197.2Show/hide
Query:  GEIIQVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
        G  I VWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
Subjt:  GEIIQVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL

Query:  AVIELLS
        AVIELLS
Subjt:  AVIELLS

XP_004142562.1 proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus]4.45e-4973.21Show/hide
Query:  IRQKFDWFEGEIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYT
        ++  F+ F+G     WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYATPY+
Subjt:  IRQKFDWFEGEIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYT

Query:  SNDDWYFIFLAV
         NDDWY+++ AV
Subjt:  SNDDWYFIFLAV

XP_008443714.1 PREDICTED: LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucumis melo]6.55e-6094.9Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        +VWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

XP_022159384.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like, partial [Momordica charantia]1.07e-4976.47Show/hide
Query:  EIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
        EIIQ WLEKHGPFDAVIDGANVG+ N H FSFIQLKR VY+MR++SPSK+MPLIILH  RVT GPA+ PNN KLIE WK CGALYATP  SNDDWY+++ 
Subjt:  EIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL

Query:  AV
        AV
Subjt:  AV

XP_038878402.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Benincasa hispida]2.46e-4475.51Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        Q WLEKHGPFDAVIDGANVG+ + HFSFIQLKR VY MR+LSP+K+MPLIILH  RVT GPA+ PNN KLIE WKNCGALY TP  SNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

TrEMBL top hitse value%identityAlignment
A0A0A0M056 PRORP domain-containing protein1.4e-4982.46Show/hide
Query:  MLICIRQKFDWFEGEIIQVWLEKHGPFDAVIDGANVGIEND-HFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYA
        MLIC+R+ FDWFEGEIIQ WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYA
Subjt:  MLICIRQKFDWFEGEIIQVWLEKHGPFDAVIDGANVGIEND-HFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYA

Query:  TPYTSNDDWYFIFL
        TPY+ NDDWY  FL
Subjt:  TPYTSNDDWYFIFL

A0A1S3B8R1 Ribonuclease P1.9e-4994.9Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        +VWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

A0A5D3D8D9 Proteinaceous RNase P 12.5e-5497.2Show/hide
Query:  GEIIQVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
        G  I VWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
Subjt:  GEIIQVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL

Query:  AVIELLS
        AVIELLS
Subjt:  AVIELLS

A0A6J1E290 Ribonuclease P2.5e-3876.47Show/hide
Query:  EIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL
        EIIQ WLEKHGPFDAVIDGANVG+ N H FSFIQLKR VY+MR++SPSK+MPLIILH  RVT GPA+ PNN KLIE WK CGALYATP  SNDDWY+++ 
Subjt:  EIIQVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFL

Query:  AV
        AV
Subjt:  AV

A0A6J1JJ38 Ribonuclease P6.9e-3673.74Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIEND-HFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        Q WLE+HGPFDAVIDGANVG+ N  HFSFIQLKR VY+MR+LSP+K+MPLIILH  RVT GPA  PNN +LIE WK+CGALYATP+ SNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIEND-HFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

SwissProt top hitse value%identityAlignment
F4JKB6 Proteinaceous RNase P 34.3e-1946.08Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF
        Q WLEKHG ++A++DGAN+G+   +     FS  QL+  V  +   S SKK PLI+LH +RV       PN+  L+E W N   LYATP  SNDDWY+++
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF

Query:  LA
         A
Subjt:  LA

Q66GI4 Proteinaceous RNase P 1, chloroplastic/mitochondrial7.6e-3262.63Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        Q WLE+HGPFDAVIDGAN+G+ N   FSF QL   V R +++SPSK++PL+ILH  RV  GPA YP N  L+E WKN GALYATP  SNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

Q680B9 Proteinaceous RNase P 22.4e-1743.14Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF
        Q WLEKHG ++A++DGAN+G+   +     FS  QL+  +  +   S + K PLI+LH RRV +     P +  L+E W + G LYATP  SNDDWY+++
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF

Query:  LA
         A
Subjt:  LA

Arabidopsis top hitse value%identityAlignment
AT2G16650.1 proteinaceous RNase P 21.7e-1843.14Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF
        Q WLEKHG ++A++DGAN+G+   +     FS  QL+  +  +   S + K PLI+LH RRV +     P +  L+E W + G LYATP  SNDDWY+++
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF

Query:  LA
         A
Subjt:  LA

AT2G32230.1 proteinaceous RNase P 15.4e-3362.63Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV
        Q WLE+HGPFDAVIDGAN+G+ N   FSF QL   V R +++SPSK++PL+ILH  RV  GPA YP N  L+E WKN GALYATP  SNDDWY+++ AV
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIFLAV

AT4G21900.1 proteinaceous RNase P 33.1e-2046.08Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF
        Q WLEKHG ++A++DGAN+G+   +     FS  QL+  V  +   S SKK PLI+LH +RV       PN+  L+E W N   LYATP  SNDDWY+++
Subjt:  QVWLEKHGPFDAVIDGANVGIENDH-----FSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYFIF

Query:  LA
         A
Subjt:  LA

AT5G60430.1 drug transmembrane transporters;antiporters5.3e-0453.85Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDHF
        Q WLEKHG ++A++DGAN+G+   +F
Subjt:  QVWLEKHGPFDAVIDGANVGIENDHF

AT5G60430.2 drug transmembrane transporters;antiporters5.3e-0453.85Show/hide
Query:  QVWLEKHGPFDAVIDGANVGIENDHF
        Q WLEKHG ++A++DGAN+G+   +F
Subjt:  QVWLEKHGPFDAVIDGANVGIENDHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTTGTATTAGGCAAAAATTTGACTGGTTTGAAGGTGAAATAATTCAGGTGTGGCTTGAAAAGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAATGTTGG
TATAGAAAATGATCACTTCAGCTTTATCCAGCTCAAAAGGGCTGTATATCGAATGCGTGAGCTGAGCCCTTCAAAAAAAATGCCACTCATAATTTTGCATACAAGACGTG
TTACTGAAGGTCCTGCACGTTATCCTAATAATATGAAATTAATAGAGATATGGAAAAATTGTGGTGCACTCTATGCTACTCCTTATACGTCCAATGATGACTGGTATTTC
ATCTTTCTTGCAGTAATTGAGTTATTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTTGTATTAGGCAAAAATTTGACTGGTTTGAAGGTGAAATAATTCAGGTGTGGCTTGAAAAGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAATGTTGG
TATAGAAAATGATCACTTCAGCTTTATCCAGCTCAAAAGGGCTGTATATCGAATGCGTGAGCTGAGCCCTTCAAAAAAAATGCCACTCATAATTTTGCATACAAGACGTG
TTACTGAAGGTCCTGCACGTTATCCTAATAATATGAAATTAATAGAGATATGGAAAAATTGTGGTGCACTCTATGCTACTCCTTATACGTCCAATGATGACTGGTATTTC
ATCTTTCTTGCAGTAATTGAGTTATTATCTTGA
Protein sequenceShow/hide protein sequence
MLICIRQKFDWFEGEIIQVWLEKHGPFDAVIDGANVGIENDHFSFIQLKRAVYRMRELSPSKKMPLIILHTRRVTEGPARYPNNMKLIEIWKNCGALYATPYTSNDDWYF
IFLAVIELLS