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IVF0005996 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005996
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFlowering time control protein FCA isoform X2
Genome locationchr11:27545672..27545953
RNA-Seq ExpressionIVF0005996
SyntenyIVF0005996
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637119.1 hypothetical protein CSA_004596, partial [Cucumis sativus]5.81e-3789.74Show/hide
Query:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPT
        MYFSPL D AGFLFLLPTLTPFSLLRLAQRYRPSAKILEF FH  P GL KFWVFAFSLPQSWIGTEETAMA TKIPT
Subjt:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPT
TYK02963.1 flowering time control protein FCA isoform X2 [Cucumis melo var. makuwa]2.45e-54100Show/hide
Query:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
        MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
Subjt:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
TrEMBL top hitse value%identityAlignment
A0A0A0KCK9 Uncharacterized protein8.8e-3991.4Show/hide
Query:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
        MYFSPL D AGFLFLLPTLTPFSLLRLAQRYRPSAKILEF FH  P GL KFWVFAFSLPQSWIGTEETAMA TKIPTPFVTLQLLLASRTPP
Subjt:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
A0A5D3BTH3 Flowering time control protein FCA isoform X29.7e-46100Show/hide
Query:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
        MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
Subjt:  MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTTCTCTCCTCTACGTGACAGCGCGGGATTCCTCTTCTTGCTCCCGACTCTGACTCCATTTTCTCTTCTTCGCCTCGCTCAAAGATACCGACCGAGTGCTAAGAT
TTTGGAATTTCCCTTTCACCATCCTCCAACAGGACTTGACAAATTTTGGGTATTCGCTTTCTCACTTCCGCAAAGCTGGATAGGCACAGAGGAGACCGCTATGGCCCTGA
CCAAGATTCCCACCCCTTTCGTCACTCTGCAGCTCCTTCTCGCTTCTCGGACTCCCCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTTCTCTCCTCTACGTGACAGCGCGGGATTCCTCTTCTTGCTCCCGACTCTGACTCCATTTTCTCTTCTTCGCCTCGCTCAAAGATACCGACCGAGTGCTAAGAT
TTTGGAATTTCCCTTTCACCATCCTCCAACAGGACTTGACAAATTTTGGGTATTCGCTTTCTCACTTCCGCAAAGCTGGATAGGCACAGAGGAGACCGCTATGGCCCTGA
CCAAGATTCCCACCCCTTTCGTCACTCTGCAGCTCCTTCTCGCTTCTCGGACTCCCCCGTGA
Protein sequenceShow/hide protein sequence
MYFSPLRDSAGFLFLLPTLTPFSLLRLAQRYRPSAKILEFPFHHPPTGLDKFWVFAFSLPQSWIGTEETAMALTKIPTPFVTLQLLLASRTPP