; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006009 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006009
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description28 kDa ribonucleoprotein, chloroplastic
Genome locationtig00000135:736084..738850
RNA-Seq ExpressionIVF0006009
SyntenyIVF0006009
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049207.1 putative G3BP-like protein [Cucumis melo var. makuwa]3.35e-170100Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV
        SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV

KAG6582419.1 hypothetical protein SDJN03_22421, partial [Cucurbita argyrosperma subsp. sororia]5.38e-15182.48Show/hide
Query:  AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEE--TAVEGGSPVESGST
        AAATG SFFTTP+RGSRS  W SDS LATPSTQVLP+LSR L ++S PLRA SER RP  IISA  VQGE A+TVGVEEG E+E   AV+GGSPVESGST
Subjt:  AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEE--TAVEGGSPVESGST

Query:  KLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSW
        KLYFGNLPYSVDS QLAAIVQD+GVAELIEVLYDR+TGKSRGFAFVTM+SI+DCNKVIENL+G  YMGRILRVNFSDKPKPKE L+PETEYKLFV NL+W
Subjt:  KLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSW

Query:  SVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
        SVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTKSEMETAL ALN+   EGRV+ VSLAEG QAQG
Subjt:  SVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

XP_004134038.1 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]8.75e-17994.2Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAVTVGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

XP_016898952.1 PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo]4.50e-17599.62Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAV VGVEEGVEEETAVEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
        SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV

XP_022157973.1 28 kDa ribonucleoprotein, chloroplastic [Momordica charantia]3.84e-15684.04Show/hide
Query:  MAAAAAATGASFF--TTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEET----AVEGG
        MAAAAA  G+SF   T   +G RSKHW SDSLLA PSTQ+LP+LSR L +ES  LRA SE+WRPVL ISAAVVQGE AVT   EEGV EE     AV GG
Subjt:  MAAAAAATGASFF--TTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEET----AVEGG

Query:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYK
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ+HGV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG+AYMGR+LRVNFSDKPKPKEPLYPETEYK
Subjt:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYK

Query:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
        LFVGNLSWSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTK EME ALEALNEVELEGRVIRVSLAEGKQAQG
Subjt:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

TrEMBL top hitse value%identityAlignment
A0A0A0L496 Uncharacterized protein4.5e-13994.2Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+WRPV+IISAAVVQGETAVTVGVEEGVEEET VEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
        SWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVSYSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

A0A1S4DSH7 LOW QUALITY PROTEIN: putative G3BP-like protein1.6e-14199.62Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAV VGVEEGVEEETAVEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
        SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV

A0A5D3CZH4 Putative G3BP-like protein1.9e-137100Show/hide
Query:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
        MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG
Subjt:  MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESG

Query:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
        STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL
Subjt:  STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL

Query:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV
        SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV
Subjt:  SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEV

A0A6J1DUT6 28 kDa ribonucleoprotein, chloroplastic6.5e-12284.04Show/hide
Query:  MAAAAAATGASF--FTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEE----TAVEGG
        MAAAAA  G+SF   T   +G RSKHW SDSLLA PSTQ+LP+LSR L +ES  LRA SE+WRPVL ISAAVVQGE AVT   EEGV EE     AV GG
Subjt:  MAAAAAATGASF--FTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEE----TAVEGG

Query:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYK
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ+HGV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG+AYMGR+LRVNFSDKPKPKEPLYPETEYK
Subjt:  SPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYK

Query:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
        LFVGNLSWSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTK EME ALEALNEVELEGRVIRVSLAEGKQAQG
Subjt:  LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG

A0A6J1IVW4 putative G3BP-like protein9.7e-11883.27Show/hide
Query:  AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEET-------AVEGGSPV
        AAATG SFFTTP+RGSRSKHW SDS LATPSTQVLPILSR L ++S PLRA SERWRP  +ISAA VQGE A+TVG EEGVEEET       AV+GGSPV
Subjt:  AAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEET-------AVEGGSPV

Query:  ESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFV
        ESGSTKLYFGNLPYSVDS QLAAIVQD+GVAELIEVLYDR+TGKSRGFAFVTM+SIEDCNKVIENL+G  YMGRILRVNFSDKPKPKE L+PETEYKLFV
Subjt:  ESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFV

Query:  GNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
         NL+WSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTKSEMETAL ALN+   EGRV+ V
Subjt:  GNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV

SwissProt top hitse value%identityAlignment
P19683 31 kDa ribonucleoprotein, chloroplastic3.1e-3642.16Show/hide
Query:  GETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRI
        G+   +  VE   EEE   E   P E    KL+ GNLPY VDS  LA + +  GV E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR+
Subjt:  GETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRI

Query:  LRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSL
        L VN +    ++P+ + P   E  Y+++VGN+ W +    L Q F E+G VV ARV+Y+ ETG+SRG+GFV+ ++++EM  A+  L+   L+GR IRV++
Subjt:  LRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSL

Query:  AEGK
        AE +
Subjt:  AEGK

P19684 33 kDa ribonucleoprotein, chloroplastic1.6e-3740.28Show/hide
Query:  ETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL
        E A++   EE +EE+        VE G  +LY GNLP+S+ SSQL+ I  + G    +E++YDR T +SRGFAFVTM S+E+  + I   DG+   GR +
Subjt:  ETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL

Query:  RVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEG
        +VNF + P+  E              + ++ +KL+V NLSW++TS+ L  AF +    + A+VIY+  +G+SRG+GF+++S+   M +AL+ +NEVELEG
Subjt:  RVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEG

Query:  RVIRVSLAEGK
        R +R+++A  K
Subjt:  RVIRVSLAEGK

P28644 28 kDa ribonucleoprotein, chloroplastic1.5e-3844.34Show/hide
Query:  AVVQGET----AVTVGVEEGVEEETAVEGGSPVES--GSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN
        AV++GE+    AV+ G E  V +E  VEGG          KL+ GNLPY VDS +LA I    GV E+ EV+Y+R T +SRGF FVTMS++E+  K +E 
Subjt:  AVVQGET----AVTVGVEEGVEEETAVEGGSPVES--GSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN

Query:  LDGTAYMGRILRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVE
        L+G    GR L VN    P+      P  ++    +++VGNL W V +  L Q F E+G VV ARV+ + ETG+SRG+GFV+ S++SE+  A+ AL+   
Subjt:  LDGTAYMGRILRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVE

Query:  LEGRVIRVSLAE
        L+GR +RV++AE
Subjt:  LEGRVIRVSLAE

P82277 30S ribosomal protein 2, chloroplastic2.8e-3741.62Show/hide
Query:  VEEETAVEGGSPVES---GSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKP
        V EET+    +   S   G+ +LY GN+P ++++ +L  IV++HG  E+ EV+YD+ +G+SR F FVTM ++ED N VIE L+ T   GR ++VN ++KP
Subjt:  VEEETAVEGGSPVES---GSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKP

Query:  ---------KPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLA
                 + ++  + E+ YK+++GNL+ +VT+E+L   F E G V+GA+V     T KS G+GFVS+S++ E+E A++ALN   LEG+ IRV+ A
Subjt:  ---------KPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLA

Q9FGS0 RNA-binding protein CP31B, chloroplastic4.3e-3837.93Show/hide
Query:  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLR--ASSERWRPVLIISAAVVQGET----AVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSV
        S   H F+ SL + P    L + S++L   SP +   + +  W       A   +GE       +V V+E  E E  V  G P      KL+ GNLPY V
Subjt:  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLR--ASSERWRPVLIISAAVVQGET----AVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSV

Query:  DSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEIL
        DS  LA + +  G  E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   +  ++++VGNL W V S  L
Subjt:  DSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEIL

Query:  TQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE
         + F E+G VV ARV+ + ETG+SRG+GFV  S ++E+  A+ AL+   LEGR I+V++AE
Subjt:  TQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE

Arabidopsis top hitse value%identityAlignment
AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-7161.67Show/hide
Query:  LRASSERWRPVLIISAAV-----VQGETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAF
        LR +    +P+LI S +      V  ET +TV +EE  +++ A     P  + +TKLYFGNLPY+VDS+ LA I+QD    EL+EVLY+R+TG+SRGFAF
Subjt:  LRASSERWRPVLIISAAV-----VQGETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAF

Query:  VTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSE
        VTMS++EDCN +I+NLDGT Y+GR L+VNF+DKPKP KEPLYPETE+KLFVGNLSW+VTSE L  AF+E G+VVGARV+++G+TG+SRGYGFV YS+K+E
Subjt:  VTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSE

Query:  METALEALNEVELEGRVIRVSLAEGKQ
        METALE+L+  ELEGR IRV+LA+GK+
Subjt:  METALEALNEVELEGRVIRVSLAEGKQ

AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-3638.46Show/hide
Query:  VTVGVEEGVEEETAVEGGSPVE---SGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL
        V +  E  VEE+   +   P E   S   KL+ GNLP++VDS+QLA + +  G  E++EV+YD+ TG+SRGF FVTMSS+ +     +  +G    GR L
Subjt:  VTVGVEEGVEEETAVEGGSPVE---SGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL

Query:  RVNFSDKPKPKEPLY---PETEY-------------------KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETAL
        RVN    P  +E  +   P + +                   +++VGNLSW V    L   F E G VV ARVIY+ ++G+S+G+GFV+Y +  E++ A+
Subjt:  RVNFSDKPKPKEPLY---PETEY-------------------KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETAL

Query:  EALNEVELEGRVIRVSLAEGK
        ++L+  +L+GR IRVS AE +
Subjt:  EALNEVELEGRVIRVSLAEGK

AT3G52150.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.4e-3638.42Show/hide
Query:  VTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVN
        +   V E  E+  A++   P    + ++Y GN+P +V + QL  +V++HG  E ++V+YD+ +G+SR F F TM S+ED N V+E L+G    GR ++VN
Subjt:  VTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVN

Query:  FSDKPKPKEP----------LYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV
         ++KP    P           + ++ YK++VGNL+ +VT E+L   F E G VV A+V     T KS G+GFV++S++ ++E A+ ALN   LEG+ IRV
Subjt:  FSDKPKPKEP----------LYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRV

Query:  SLA
        + A
Subjt:  SLA

AT4G24770.1 31-kDa RNA binding protein3.2e-3642.29Show/hide
Query:  VEEGVEEETAVEGGS-------PVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL
        V EG E E  V  G+       P  S   KL+ GNL Y V+S  LA + +  G  E+ EV+Y+R T +SRGF FVTMSS+++    +E  +     GR+L
Subjt:  VEEGVEEETAVEGGS-------PVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL

Query:  RVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLA
         VN +     +P+ + P   E  ++++VGNL W V +  L Q F E+G VV ARV+Y+ ETG+SRG+GFV+ S   E+  A+ AL+   LEGR IRV++A
Subjt:  RVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLA

Query:  E
        E
Subjt:  E

AT5G50250.1 chloroplast RNA-binding protein 31B3.0e-3937.93Show/hide
Query:  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLR--ASSERWRPVLIISAAVVQGET----AVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSV
        S   H F+ SL + P    L + S++L   SP +   + +  W       A   +GE       +V V+E  E E  V  G P      KL+ GNLPY V
Subjt:  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLR--ASSERWRPVLIISAAVVQGET----AVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSV

Query:  DSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEIL
        DS  LA + +  G  E+ EV+Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   +  ++++VGNL W V S  L
Subjt:  DSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSEIL

Query:  TQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE
         + F E+G VV ARV+ + ETG+SRG+GFV  S ++E+  A+ AL+   LEGR I+V++AE
Subjt:  TQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTGCCGCAGCCGCCACCGGAGCCTCCTTCTTCACCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGTTCTCTGATTCTCTCCTCGCAACTCCATCCACCCA
AGTTCTGCCCATATTGTCCCGCTCTCTGACCATTGAATCGCCTCCGCTTAGAGCTTCCTCGGAGAGGTGGCGGCCGGTTCTGATCATCTCGGCCGCCGTTGTACAAGGAG
AGACGGCTGTGACGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGCGGTGGAAGGCGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCT
TACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATCATGGTGTCGCTGAGCTCATTGAGGTTCTGTATGACAGAAATACTGGAAAAAGTAGAGGATTTGCATT
TGTAACCATGAGCAGCATTGAAGATTGCAATAAAGTGATTGAAAATCTGGATGGAACTGCTTACATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCCAAGCCCA
AGGAACCTTTGTATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCCTGGTCAGTAACATCTGAAATTTTGACACAAGCATTTCAAGAATATGGAAATGTGGTA
GGAGCAAGGGTCATTTATAACGGAGAGACCGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAAATGGAAACAGCTCTTGAAGCTCTTAATGAAGT
GGAACTTGAAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACAGGGGTAG
mRNA sequenceShow/hide mRNA sequence
CAAGCGGCCACGTCAGCATGAGCAACTAACTTAAAACTGCACCATCACATTTTTACTCACCTCTGCTGTTACGCATCTCCTCCCCCATCAAATTCCACCACCATGGCCGC
TGCCGCAGCCGCCACCGGAGCCTCCTTCTTCACCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGTTCTCTGATTCTCTCCTCGCAACTCCATCCACCCAAGTTCTGC
CCATATTGTCCCGCTCTCTGACCATTGAATCGCCTCCGCTTAGAGCTTCCTCGGAGAGGTGGCGGCCGGTTCTGATCATCTCGGCCGCCGTTGTACAAGGAGAGACGGCT
GTGACGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGCGGTGGAAGGCGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCTTACAGTGT
TGATAGTTCACAGCTCGCCGCTATCGTTCAGGATCATGGTGTCGCTGAGCTCATTGAGGTTCTGTATGACAGAAATACTGGAAAAAGTAGAGGATTTGCATTTGTAACCA
TGAGCAGCATTGAAGATTGCAATAAAGTGATTGAAAATCTGGATGGAACTGCTTACATGGGCAGAATTTTGAGGGTTAATTTCTCAGACAAACCCAAGCCCAAGGAACCT
TTGTATCCAGAAACTGAGTATAAACTTTTTGTCGGAAACTTATCCTGGTCAGTAACATCTGAAATTTTGACACAAGCATTTCAAGAATATGGAAATGTGGTAGGAGCAAG
GGTCATTTATAACGGAGAGACCGGAAAGTCACGTGGTTATGGCTTTGTTTCTTATTCAACAAAATCAGAAATGGAAACAGCTCTTGAAGCTCTTAATGAAGTGGAACTTG
AAGGCAGGGTAATACGTGTAAGCTTGGCTGAAGGAAAACAGGCACAGGGGTAGATGTAGAAATGGTTTATTTGTATGTCAAGCATACAGTGGCTAATCAAGAAACGGGAA
AGAATTTCTAGCTAGCTGTTACTGAACAAACCGCTAAGTGACCGAATCTTCTCCCTTCTTTCTTGTTGTATATACCTCATTTCCCACTTTTGTACCGTACAAGCTAAATT
CAGCGGGAAATTTTATTTTGTCTCCGACAATTGTGGTAGAGATATCATATCAAACTTGAGTTGATTCCAAAGCTGAAAATGGTTGTACCATGATTGAGAATATAATAG
Protein sequenceShow/hide protein sequence
MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVTVGVEEGVEEETAVEGGSPVESGSTKLYFGNLP
YSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVV
GARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG