; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006013 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006013
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr03:26080501..26082129
RNA-Seq ExpressionIVF0006013
SyntenyIVF0006013
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150882.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]1.48e-18094.23Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
        MAVS SAAT  HLHPSSSS+TPLFNP+ QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFA
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA

Query:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
        MLGV+GVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLGIAKD+
Subjt:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_008444623.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis melo]2.40e-193100Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
        MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA

Query:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
        MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
Subjt:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022951251.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata]1.32e-15584.11Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF
        MAVS+SAAT FHL PSSS ++   +P      LRSPSR ++   A +QS+ RQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKW+VQAELVH RF
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF

Query:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD
        AMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLLNPLG+AKD
Subjt:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD

Query:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        +KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

XP_023001834.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima]2.18e-15784.29Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF
        MAVS+SAATPFHL PSSS ++   +       LRSPSR ++   A +QS+ RQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKW+VQAELVH RF
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF

Query:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD
        AMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLLNPLG+AKD
Subjt:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD

Query:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        +KNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_038886221.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida]6.37e-16990.11Show/hide
Query:  MAVSISAATP----FHLHPSSSS--HTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAEL
        MAVS+SAAT     FHL PSSSS  +TP FNP NQ +RLRSPSR +LLIA AQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAEL
Subjt:  MAVSISAATP----FHLHPSSSS--HTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAEL

Query:  VHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPL
        VH RFAMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPL
Subjt:  VHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPL

Query:  GIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        GIAKD+KNAH+WKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
Subjt:  GIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB4 Chlorophyll a-b binding protein, chloroplastic5.0e-14094.23Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
        MAVS SAAT  HLHPSSSS+TPLFNP +QF+RLRSPSR +LLIAHAQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFA
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA

Query:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
        MLGV+GVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLNPLGIAKD+
Subjt:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A1S3BBL1 Chlorophyll a-b binding protein, chloroplastic9.0e-150100Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
        MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA

Query:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
        MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
Subjt:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A5A7UY53 Chlorophyll a-b binding protein, chloroplastic9.0e-150100Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
        MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFA

Query:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
        MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV
Subjt:  MLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDV

Query:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1GH16 Chlorophyll a-b binding protein, chloroplastic4.0e-12184.11Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF
        MAVS+SAAT FHL PSSS ++   +P      LRSPSR ++   A +QS+ RQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKW+VQAELVH RF
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF

Query:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD
        AMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLLNPLG+AKD
Subjt:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD

Query:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        +KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

A0A6J1KNS0 Chlorophyll a-b binding protein, chloroplastic2.1e-12284.29Show/hide
Query:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF
        MAVS+SAATPFHL PSSS ++   +       LRSPSR ++   A +QS+ RQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKW+VQAELVH RF
Subjt:  MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRF

Query:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD
        AMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLLNPLG+AKD
Subjt:  AMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKD

Query:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        +KNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  VKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic4.9e-5247.51Show/hide
Query:  SRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFAN
        +R +  +  A    R  W PG  PPP+LDG+L GDFGFDPLGL  DP+SL+W  QAELVHCR+AMLG AG+ + +LL   GI   P WY AG  EY F +
Subjt:  SRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFAN

Query:  KRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP
          TLFIV+L+L+G+ E +R+ D   PG    +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGP
Subjt:  KRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP

Query:  IDNLVEHLSNPWHKTIIQTLS
        IDNL  HL++P H TI    S
Subjt:  IDNLVEHLSNPWHKTIIQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.4e-5351.72Show/hide
Query:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET
        WLPGL  P YL G+L GD GFDPLGL EDP++LKW+VQAELV+ R+AMLGVAG+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLS
        T +
Subjt:  TLS

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic4.0e-10282.86Show/hide
Query:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPPYLDG L GD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGVAG+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKDV+NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.0e-5352.17Show/hide
Query:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET
        WLPGL  P YL G+L GD GFDPLGL EDP++L+W+VQAELV+ R+AMLGVAG+LL ++    GI  +P WY AG  EY FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTF--FGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
        +R+ D K+PGS  Q+  F  + L A     E GYPGG + NPL  A  +    + K KEI NGRLAM+A LG  +Q  VT  GP DNL++H+S+PWH TI
Subjt:  KRYMDFKSPGSQAQEGTF--FGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI

Query:  IQTLSSS
        +QTL  +
Subjt:  IQTLSSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.4e-5349.77Show/hide
Query:  SRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFA
        SRP   + A A    R  W PG  PP +LDG+L GDFGFDPLGL  DPDSLKW VQAE+VHCR+AMLG AG+ + + L   GI   P WY AG  EY F 
Subjt:  SRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFA

Query:  NKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTG
        +K TLF+V+L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TG
Subjt:  NKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTG

Query:  PIDNLVEHLSNPWHKTI
        PIDNL  HL++P H TI
Subjt:  PIDNLVEHLSNPWHKTI

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 52.8e-10382.86Show/hide
Query:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPPYLDG L GD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGVAG+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKDV+NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G45474.2 photosystem I light harvesting complex gene 52.8e-10382.86Show/hide
Query:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF
        R TWLPGL+PPPYLDG L GD+GFDPLGLGEDP+SLKWYVQAELVH RFAMLGVAG+L TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKDV+NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G61520.1 photosystem I light harvesting complex gene 34.6e-4541.33Show/hide
Query:  QSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSL------KWYVQAELVHCRFAMLGVAGVLLTDLLRVTGI----SELPVWYNAGAVEYG---
        Q  +R  W        YLDG+L GD+GFDPLGL  DP+        +W    E+++ RFAMLG AG +  ++L   G+    + LP W+  G +      
Subjt:  QSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSL------KWYVQAELVHCRFAMLGVAGVLLTDLLRVTGI----SELPVWYNAGAVEYG---

Query:  --FANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGL-EPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYV
          +A+  TLF++++ LMGF E +R  D+ +PGS  ++  F GLE    G   P YPGGP  NPLG  KD K+  + KLKE+KNGRLAM+A+LG F+Q  V
Subjt:  --FANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGL-EPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYV

Query:  THTGPIDNLVEHLSNPWHKTIIQTL
        T  GP  NL++HL++P +  ++ +L
Subjt:  THTGPIDNLVEHLSNPWHKTIIQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.2e-5451.72Show/hide
Query:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET
        WLPGL  P YL G+L GD GFDPLGL EDP++LKW+VQAELV+ R+AMLGVAG+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLS
        T +
Subjt:  TLS

AT3G61470.1 photosystem I light harvesting complex gene 23.2e-5449.77Show/hide
Query:  SRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFA
        SRP   + A A    R  W PG  PP +LDG+L GDFGFDPLGL  DPDSLKW VQAE+VHCR+AMLG AG+ + + L   GI   P WY AG  EY F 
Subjt:  SRPSLLI-AHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISELPVWYNAGAVEYGFA

Query:  NKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTG
        +K TLF+V+L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TG
Subjt:  NKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTG

Query:  PIDNLVEHLSNPWHKTI
        PIDNL  HL++P H TI
Subjt:  PIDNLVEHLSNPWHKTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCAATTTCAGCAGCCACTCCCTTCCATCTCCACCCTTCTTCTTCGTCTCACACTCCCTTATTCAACCCTACTAACCAGTTCGTCCGCCTCCGATCGCCTTC
CCGCCCCTCACTATTAATAGCTCATGCTCAATCGGAGCACCGTCAAACATGGCTTCCCGGCCTCGACCCCCCACCGTATCTCGACGGAACCCTTGTCGGCGATTTTGGAT
TCGACCCACTTGGTCTCGGCGAGGACCCAGATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTCGCCATGCTCGGCGTCGCTGGAGTTCTTCTCACT
GATTTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTT
GATGGGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCTTTTGAAGGTCTCGAGCCCG
GATACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATGTCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCGATGGTAGCC
ATGCTTGGGATCTTCGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAG
CTCAAGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
GAGAAAACAAAGAGAGAACTAAGAAACAAATAAAGAGGATAACAAGAAGAATAACGGTAGCCACTGCAAAAGGAGAGCAAAGATCCATGGCGGTTTCAATTTCAGCAGCC
ACTCCCTTCCATCTCCACCCTTCTTCTTCGTCTCACACTCCCTTATTCAACCCTACTAACCAGTTCGTCCGCCTCCGATCGCCTTCCCGCCCCTCACTATTAATAGCTCA
TGCTCAATCGGAGCACCGTCAAACATGGCTTCCCGGCCTCGACCCCCCACCGTATCTCGACGGAACCCTTGTCGGCGATTTTGGATTCGACCCACTTGGTCTCGGCGAGG
ACCCAGATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTCGCCATGCTCGGCGTCGCTGGAGTTCTTCTCACTGATTTGCTTCGTGTTACAGGGATC
AGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGATGGGGTTTGTGGAAACTAAAAG
GTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCTTTTGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGTTGA
ATCCTCTTGGCATTGCTAAAGATGTCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCGATGGTAGCCATGCTTGGGATCTTCGTGCAAGCT
TATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTCAAGTCCTTAAAGAACAAGATG
TTGAAACTTGATAGTCTCTCTACTCAATGAGCAAAATATAACATGACATTGGAGATTTATCAGCTAAAAAAGAGTACAGATGAAAAACAAATGACCTTGTAATTTGATTT
GATCAATACAACAAATCGGAAATTCGTTTTGATTTTTA
Protein sequenceShow/hide protein sequence
MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDPPPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLT
DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVA
MLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP