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IVF0006081 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006081
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:19751867..19752073
RNA-Seq ExpressionIVF0006081
SyntenyIVF0006081
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026116.1 retrotransposon protein [Cucumis melo var. makuwa]9.42e-3583.82Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVN  GWRSDNGTF+P YLNQLARM+ FKIPG N+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

KAA0053618.1 retrotransposon protein [Cucumis melo var. makuwa]4.67e-3585.29Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKI GSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

KAA0054347.1 retrotransposon protein [Cucumis melo var. makuwa]1.02e-3589.71Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKHNWTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSNVHASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

KAA0063337.1 retrotransposon protein [Cucumis melo var. makuwa]2.82e-3686.76Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

TYJ99726.1 retrotransposon protein [Cucumis melo var. makuwa]2.20e-3585.29Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPG N+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

TrEMBL top hitse value%identityAlignment
A0A5A7U4P8 Retrotransposon protein1.1e-2786.76Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

A0A5A7UIE9 Retrotransposon protein1.0e-2889.71Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKHNWTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSNVHASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

A0A5A7UME4 Retrotransposon protein1.1e-2786.76Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

A0A5D3CBF7 Retrotransposon protein1.1e-2786.76Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

A0A5D3DPR5 Retrotransposon protein1.1e-2786.76Show/hide
Query:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN
        M SSSRLPKH WTKEEEAGLVECLVELVNA GWRSDNGTF+P YLNQLARM+ FKIPGSN+HASTID+
Subjt:  MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGGCAGGCCTCGTCGAGTGCCTCGTGGAGTTAGTCAATGCTGATGGGTGGAGGTCCGACAA
CGGAACGTTTCAGCCCGAGTACCTCAATCAGCTGGCGAGAATGATAACCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCGATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGGCAGGCCTCGTCGAGTGCCTCGTGGAGTTAGTCAATGCTGATGGGTGGAGGTCCGACAA
CGGAACGTTTCAGCCCGAGTACCTCAATCAGCTGGCGAGAATGATAACCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCGATAATTGA
Protein sequenceShow/hide protein sequence
MVSSSRLPKHNWTKEEEAGLVECLVELVNADGWRSDNGTFQPEYLNQLARMITFKIPGSNVHASTIDN