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IVF0006095 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006095
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase, catalytic core
Genome locationchr05:15275822..15276611
RNA-Seq ExpressionIVF0006095
SyntenyIVF0006095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051398.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.26e-1745.14Show/hide
Query:  ADGTDEETENSFKPALANSDLLEESCVKILSPGF-TCTRSVSPSHSSPQIHFSPFRIPGSNCDFIRGFPSSTIPQSVDDVSDNEDSIISVSSEDLSPEEV
        ADGT   T+  FK   A S  + + C    S GF +   S S S SS  +HFSPF+IPG NCDF RG PSSTI  +VD+ S++EDS+ISVSSE+L PEE 
Subjt:  ADGTDEETENSFKPALANSDLLEESCVKILSPGF-TCTRSVSPSHSSPQIHFSPFRIPGSNCDFIRGFPSSTIPQSVDDVSDNEDSIISVSSEDLSPEEV

Query:  EGAKGAERQKEEEENIDASGAEFANLFLTRKKEIVTTEASNIPS
           +  E    E ++ID+ G EFAN     +++ V  +    PS
Subjt:  EGAKGAERQKEEEENIDASGAEFANLFLTRKKEIVTTEASNIPS
TrEMBL top hitse value%identityAlignment
A0A5A7U808 Integrase, catalytic core6.6e-1545.14Show/hide
Query:  ADGTDEETENSFKPALANSDLLEESCVKILSPGF-TCTRSVSPSHSSPQIHFSPFRIPGSNCDFIRGFPSSTIPQSVDDVSDNEDSIISVSSEDLSPEEV
        ADGT   T+  FK   A S  + + C    S GF +   S S S SS  +HFSPF+IPG NCDF RG PSSTI  +VD+ S++EDS+ISVSSE+L PEE 
Subjt:  ADGTDEETENSFKPALANSDLLEESCVKILSPGF-TCTRSVSPSHSSPQIHFSPFRIPGSNCDFIRGFPSSTIPQSVDDVSDNEDSIISVSSEDLSPEEV

Query:  EGAKGAERQKEEEENIDASGAEFANLFLTRKKEIVTTEASNIPS
           +  E    E ++ID+ G EFAN     +++ V  +    PS
Subjt:  EGAKGAERQKEEEENIDASGAEFANLFLTRKKEIVTTEASNIPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCGGCCAAAATGTTATATTCTCGGAAAAAGCTGCAGAATCCAAAGGTCACTCCACTTCAGACAATTAAGAAAGCTCTTTCAGCCCTTCAAACTTTGCCAAGTGT
CCAGATAATTGGGGTCTCCTTTAGTGCAAATTCTCCAGGGTTCTGGTATGCTGATGGGACTGATGAAGAGACAGAAAATTCCTTCAAGCCAGCCTTGGCAAACTCAGACC
TATTGGAAGAAAGCTGTGTGAAAATCCTTAGTCCTGGATTTACTTGCACCAGGTCAGTTAGCCCTTCCCATTCTTCTCCCCAAATTCATTTTTCCCCATTCAGAATACCT
GGCTCAAACTGCGATTTTATCCGAGGTTTCCCCTCCTCCACAATCCCACAATCAGTAGATGACGTATCAGACAATGAAGATTCCATAATCAGTGTTAGTAGCGAAGATCT
ATCCCCAGAAGAAGTGGAAGGAGCCAAGGGCGCTGAGAGGCAAAAAGAAGAGGAAGAGAATATAGATGCAAGTGGGGCTGAATTTGCAAATTTATTTCTCACCAGGAAAA
AAGAAATAGTCACGACAGAAGCTAGCAACATTCCCTCACATCTGGTTCAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCGGCCAAAATGTTATATTCTCGGAAAAAGCTGCAGAATCCAAAGGTCACTCCACTTCAGACAATTAAGAAAGCTCTTTCAGCCCTTCAAACTTTGCCAAGTGT
CCAGATAATTGGGGTCTCCTTTAGTGCAAATTCTCCAGGGTTCTGGTATGCTGATGGGACTGATGAAGAGACAGAAAATTCCTTCAAGCCAGCCTTGGCAAACTCAGACC
TATTGGAAGAAAGCTGTGTGAAAATCCTTAGTCCTGGATTTACTTGCACCAGGTCAGTTAGCCCTTCCCATTCTTCTCCCCAAATTCATTTTTCCCCATTCAGAATACCT
GGCTCAAACTGCGATTTTATCCGAGGTTTCCCCTCCTCCACAATCCCACAATCAGTAGATGACGTATCAGACAATGAAGATTCCATAATCAGTGTTAGTAGCGAAGATCT
ATCCCCAGAAGAAGTGGAAGGAGCCAAGGGCGCTGAGAGGCAAAAAGAAGAGGAAGAGAATATAGATGCAAGTGGGGCTGAATTTGCAAATTTATTTCTCACCAGGAAAA
AAGAAATAGTCACGACAGAAGCTAGCAACATTCCCTCACATCTGGTTCAAATGTGA
Protein sequenceShow/hide protein sequence
MLAAKMLYSRKKLQNPKVTPLQTIKKALSALQTLPSVQIIGVSFSANSPGFWYADGTDEETENSFKPALANSDLLEESCVKILSPGFTCTRSVSPSHSSPQIHFSPFRIP
GSNCDFIRGFPSSTIPQSVDDVSDNEDSIISVSSEDLSPEEVEGAKGAERQKEEEENIDASGAEFANLFLTRKKEIVTTEASNIPSHLVQM