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IVF0006096 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006096
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr04:19627795..19630521
RNA-Seq ExpressionIVF0006096
SyntenyIVF0006096
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.49e-3074.32Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDST--NNQNHELNQKKCCCFPWPRK
        MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ AR TPT P +S   +NQN E NQKKCCCFPWP K
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDST--NNQNHELNQKKCCCFPWPRK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]1.07e-2071.21Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDST--NNQNHELNQKKC
        MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ AR TPT P +S   +NQN E NQK C
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDST--NNQNHELNQKKC

KCW48444.1 hypothetical protein EUGRSUZ_K02142 [Eucalyptus grandis]5.32e-1652Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK
        + D+ AAVPKFGEWD+ D  + + YT IFNKVREERQ  A  G    P  P     ++    N K CCCFPWPRK
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK

XP_010036800.2 RPM1-interacting protein 4 [Eucalyptus grandis]5.32e-1652Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK
        + D+ AAVPKFGEWD+ D  + + YT IFNKVREERQ  A  G    P  P     ++    N K CCCFPWPRK
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]1.37e-3481.08Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARG-TPTRPID-STNNQNHELNQKKCCCFPWPRK
        MADNEA VPKFGEWDDRDAKAPENYTAIF KVRE RQ+   R  TP R I+ STNNQNHE NQKKCCCFPWPRK
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARG-TPTRPID-STNNQNHELNQKKCCCFPWPRK

TrEMBL top hitse value%identityAlignment
A0A059A405 AvrRpt-cleavage domain-containing protein3.2e-1252Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK
        + D+ AAVPKFGEWD+ D  + + YT IFNKVREERQ  A  G    P  P     ++    N K CCCFPWPRK
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGT---PTRPIDSTNNQNHELNQKKCCCFPWPRK

A0A0A0L950 AvrRpt-cleavage domain-containing protein8.9e-2380.28Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPWPR
        MADNE AVPKFGEWDD DAKAPENYTAIFNKVREERQDQ  RGTPTR IDSTN+QNHE NQK      W R
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPWPR

A0A6N2AQE8 AvrRpt-cleavage domain-containing protein9.3e-1252.94Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q   + GTP+R  ++T   N E  Q+K CC PW
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW

M1CPC9 RIN4c protein2.1e-1152.94Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q   + GTP+R  ++T   N E  Q K CC PW
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW

M1CPD0 RIN4c protein2.1e-1152.94Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q   + GTP+R  ++T   N E  Q K CC PW
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPW

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.4e-0444.44Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTP
        M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTP

Q8GYN5 RPM1-interacting protein 48.6e-0746.88Show/hide
Query:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQA----ARGTPTRPIDSTNNQNHELNQKKCCCF
        VPKFG+WD+ +  + + YT IFNKVREER   A    +  TPT    S+ N N   N   CCCF
Subjt:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQA----ARGTPTRPIDSTNNQNHELNQKKCCCF

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-0537.14Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKC----CC
        MAD    +PKFGEWD  D  + E +T IFNK R E++      +P +  +   N+N E+ +K      CC
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKC----CC

AT3G07195.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-0541.07Show/hide
Query:  NYTAIFNKVREERQDQAAR-------GTPTRPIDSTNNQNHELNQKKCCCFPWPRK
        +YT IF KV+EER +   R        TP+RPI+S ++Q+      K CCF W R+
Subjt:  NYTAIFNKVREERQDQAAR-------GTPTRPIDSTNNQNHELNQKKCCCFPWPRK

AT3G25070.1 RPM1 interacting protein 46.1e-0846.88Show/hide
Query:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQA----ARGTPTRPIDSTNNQNHELNQKKCCCF
        VPKFG+WD+ +  + + YT IFNKVREER   A    +  TPT    S+ N N   N   CCCF
Subjt:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQA----ARGTPTRPIDSTNNQNHELNQKKCCCF

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein5.8e-0636.67Show/hide
Query:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCF
        +PKFGEWD  D  + E +T IF K R++++  A+    ++  D+  +Q+ E  +K+ CCF
Subjt:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCF

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein9.8e-0644.44Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTP
        M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGACAGGGATGCAAAAGCACCGGAGAACTACACGGCTATTTTCAACAAGGTGCGGGAAGAGAGACA
AGATCAAGCAGCGAGAGGGACGCCAACACGGCCGATTGACAGCACAAACAACCAAAATCATGAACTGAATCAAAAGAAATGCTGTTGTTTTCCATGGCCAAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTTCGTTTATTAACAATGTAACTTCATTTCTTCTTTCCTTTCTTCCTTCATCAACCCATTCCCTCTCTCTCTCTCTCTAAAACTCATCCCCTCCCTCTGCTCCCT
TTCCGGTCACCTTCCTCGCCGTGATTTCTCGTCGGAGTCCGGTAGATCTTTCCCATTTCGGACTGGTCCTCGCTGCCGTGCAGAAGGATAAGAAATCACCATGGCTGATA
ACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGACAGGGATGCAAAAGCACCGGAGAACTACACGGCTATTTTCAACAAGGTGCGGGAAGAGAGACAAGATCAAGCA
GCGAGAGGGACGCCAACACGGCCGATTGACAGCACAAACAACCAAAATCATGAACTGAATCAAAAGAAATGCTGTTGTTTTCCATGGCCAAGAAAATGATATTGTTCTAC
ATCTTCATAAGCTCAGTTTTACGTGGACGTGTGAATATATATATTATTTGAAGGAGAGGATCCGTTTGGCTGCAGCAAATAACCTTCTGTGCCATCTAATGTAAGTGTTT
GTTTGTAGACAAATAAAGTTGTGGGAAAAAGACAGAAACTGGGGTGTTTTGGGTTATATTATTTTTTATTATTACTTGAAATTTTGCTTCTGCTTGTGTTGTATTCTTCA
CTCTAATAATTGTATTGTGAGGTTGACCTATTTGATTACTATTCAACG
Protein sequenceShow/hide protein sequence
MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQAARGTPTRPIDSTNNQNHELNQKKCCCFPWPRK