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IVF0006163 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006163
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a/b-binding family protein
Genome locationchr01:9037204..9038043
RNA-Seq ExpressionIVF0006163
SyntenyIVF0006163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]8.02e-81100Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDTNVDTTLHL
        KFGPENSFMVSTLRSFDTNVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDTNVDTTLHL

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]3.47e-5386.24Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRH+SEPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHLEP  NGS T R LDSNSLSLGLNL++N GKQVDIDIHEARS+P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFM
        KF   NSFM
Subjt:  KFGPENSFM

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]1.72e-2353.44Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        M RH SEP +VGTSIALLQERFRQLQK K +RE+KE++ LL +SN +  S              R L  NSLSLGLNL  N GKQVD   HE R +P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-----NVDTTLHL
        K  P       T RS+DT     +VDTTLHL
Subjt:  KFGPENSFMVSTLRSFDT-----NVDTTLHL

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]5.00e-2659.5Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVD-ASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPS-
        MGRH SE TM+GTSIALLQERFRQLQK+KQ+RE+KELL+LL +SNRV+ +SIMHLE   N S   R L+ +SLSLGLN   + GKQVDI  HEAR++ S 
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVD-ASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPS-

Query:  ------DTKFGPENSFMVSTL
              +T+F P   F++S L
Subjt:  ------DTKFGPENSFMVSTL

XP_003617949.1 uncharacterized protein LOC11418701 [Medicago truncatula]1.33e-1846.46Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGR D++PTMV +SIALLQERFRQL+K K++RE K+LL LL   N   AS   L    N     R    +SLSLGLNL   +G        +  ++ S+T
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDTN-VDTTLHL
           P +    ST R+FDT+ VDT+LHL
Subjt:  KFGPENSFMVSTLRSFDTN-VDTTLHL

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein3.7e-4885.83Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRH+SEPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHL  EPNGS T R LDSNSLSLGLNL++N GKQVDIDIHEARS+P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-NVDTTLHL
        KF   NSFMVST RSFD+ NVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDT-NVDTTLHL

A0A2N9FNY6 Uncharacterized protein7.8e-1445.45Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS
        MGR  ++PTMV +SIALLQERFRQL+K K++RE KELL L  E+ R+     H EP     +P      R    +S SLGLNL   + KQ D    +A  
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS

Query:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL
        +P+     P  + M ST RSF+ ++VDT+LHL
Subjt:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL

A0A5D3E685 Uncharacterized protein3.4e-62100Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDTNVDTTLHL
        KFGPENSFMVSTLRSFDTNVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDTNVDTTLHL

A0A6P6A4C9 uncharacterized protein LOC1113062142.3e-1343.94Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS
        MGR   +PTMV +SIALLQERFRQLQK ++KRE+KELL L  ES R   + M  EP     +P   L  R     S SLGLN   +  +Q D     A +
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS

Query:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL
        +P+ T   P ++   ST ++ + ++VDT+LHL
Subjt:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL

G7KEN3 Uncharacterized protein1.2e-1446.46Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGR D++PTMV +SIALLQERFRQL+K K++RE K+LL LL   N   AS   L    N     R    +SLSLGLNL   +G        +  ++ S+T
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-NVDTTLHL
           P +    ST R+FDT +VDT+LHL
Subjt:  KFGPENSFMVSTLRSFDT-NVDTTLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCT
TCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTTAAGAGTTTTGGATTCCAATTCCCTCTCCC
TTGGTTTGAATTTGAAGCATAATGAAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTG
AGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAG
mRNA sequenceShow/hide mRNA sequence
AAAACATTCTAATCCTAATATCTTATAAGTACACATTGATCTCCATAACTATGTACACTTCACATACTATAAGCAGCTGCAGCTTAAACTCCCCTTGAGAGTGTTCTCCA
ATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCT
TCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTTAAGAGTTTTGGATTCCAATTCCCTCTCCC
TTGGTTTGAATTTGAAGCATAATGAAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTG
AGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAGATAATTTCTTCACCTAGTATTTCTGTTAGCTTTATTTGCTTGGTTCTCTCCCCACCTAA
GAATGAAAAAACGTGTGTTGAATTGATATCTGATGTGATCAATATGCATTCTATTGATGATGTCCTAGACATTTTGTAAGATGTCTATTTGCTTGGTTAGTTTAGCTCCA
GGAATGTGCATAATGAGAGAGAGAGAGAGGGAAGGAAGGGAAGTGATGGAAAAAACAACTCTTAAGTGAGACCATGTCTTTTACCAATTCCATTATGTTTAAATCTCTCT
CTTTGGGTATCCTAGTTTCAACATTCTTCTCTGTATGAAAGCTCTATGTCTATGTCAAGGTGTGCATAAA
Protein sequenceShow/hide protein sequence
MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDTKFGPENSFMV
STLRSFDTNVDTTLHL