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IVF0006166 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006166
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr04:10473212..10473850
RNA-Seq ExpressionIVF0006166
SyntenyIVF0006166
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.15e-0651.32Show/hide
Query:  QPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +PTWSR           F+     + TAV     CP+  VDA   T DAA  RQRRPMA RARGTQKKDGR RL L
Subjt:  QPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
KAA0066232.1 transposase [Cucumis melo var. makuwa]5.26e-0988.24Show/hide
Query:  MACPLVDAGLVTADAAPPRQRRPMAGRARGTQKK
        MACP VDAG+ TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPLVDAGLVTADAAPPRQRRPMAGRARGTQKK
KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.70e-1079.55Show/hide
Query:  MACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP+  VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.80e-0560Show/hide
Query:  TTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSLWL-PSV
        T A         VDA   T D   PRQRRPMAGRARGTQKKDGR RL L + PSV
Subjt:  TTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSLWL-PSV
TrEMBL top hitse value%identityAlignment
A0A5A7SMF0 NBS-LRR type resistance protein2.9e-0551.32Show/hide
Query:  QPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +PTWSR           F+     + TAV     CP+  VDA   T DAA  RQRRPMA RARGTQKKDGR RL L
Subjt:  QPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
A0A5A7VD11 Transposase7.0e-0788.24Show/hide
Query:  MACPLVDAGLVTADAAPPRQRRPMAGRARGTQKK
        MACP VDAG+ TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPLVDAGLVTADAAPPRQRRPMAGRARGTQKK
A0A5A7VN13 NBS-LRR type resistance protein8.2e-0879.55Show/hide
Query:  MACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP+  VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACPL--VDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
A0A5D3D2P4 Retrovirus-related Pol polyprotein from transposon TNT 1-945.5e-0461.22Show/hide
Query:  TTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        T A         VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  TTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCGGCTCGAACAAGTATCGCGGCTCGGCTTGGACAGGGATTGTGGCTCGGCTTGGCAGCGATTGTGGCTCGGCTTGGCAGCGATCTCGGCTCGGCTTGGACA
GCCGACTTGGAGCCGGGTCGGGTTGGACGAAGAAAATGGTAGCCGCGGTTTCGAGGGTCCTTTCTTCCGGCGAACGACGGCGGTACGAAGGCCGATGGCTTGCCCTCTCG
TCGATGCTGGTTTGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCGTGGACGGCTGTCACTG
TGGCTTCCGTCGGTGAGTGCGGATGGAGAGAGACGGCGGTCGTCGAAGGCGCACGGACGGAAGAAGAAAAGAATGAGGAGGAAGAGATGGGCTGCTGGCGGTTGGAGGCG
GAACGGAATGGATGGAGGACGAAGAGAAAAAAATGGGTGGCGGCGCGCGGTGGAGAGGAGAAAACGGAAGAGAGAAAAATCGATGGGGGGGGGGGGCGGCGCGGCTAGGG
TTTCTTCTTCTTCTCTTTTTTTTTTTTTTTGTAAATTATATATATATATACATATAAACTTTAATAATTATAAACAATTAATAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCGGCTCGAACAAGTATCGCGGCTCGGCTTGGACAGGGATTGTGGCTCGGCTTGGCAGCGATTGTGGCTCGGCTTGGCAGCGATCTCGGCTCGGCTTGGACA
GCCGACTTGGAGCCGGGTCGGGTTGGACGAAGAAAATGGTAGCCGCGGTTTCGAGGGTCCTTTCTTCCGGCGAACGACGGCGGTACGAAGGCCGATGGCTTGCCCTCTCG
TCGATGCTGGTTTGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCGTGGACGGCTGTCACTG
TGGCTTCCGTCGGTGAGTGCGGATGGAGAGAGACGGCGGTCGTCGAAGGCGCACGGACGGAAGAAGAAAAGAATGAGGAGGAAGAGATGGGCTGCTGGCGGTTGGAGGCG
GAACGGAATGGATGGAGGACGAAGAGAAAAAAATGGGTGGCGGCGCGCGGTGGAGAGGAGAAAACGGAAGAGAGAAAAATCGATGGGGGGGGGGGGCGGCGCGGCTAGGG
TTTCTTCTTCTTCTCTTTTTTTTTTTTTTTGTAAATTATATATATATATACATATAAACTTTAATAATTATAAACAATTAATAGTTTAA
Protein sequenceShow/hide protein sequence
MAARLEQVSRLGLDRDCGSAWQRLWLGLAAISARLGQPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
WLPSVSADGERRRSSKAHGRKKKRMRRKRWAAGGWRRNGMDGGRREKNGWRRAVERRKRKREKSMGGGGGAARVSSSSLFFFFCKLYIYIHINFNNYKQLIV