; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006168 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006168
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
Genome locationchr07:23315116..23317357
RNA-Seq ExpressionIVF0006168
SyntenyIVF0006168
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152330.1 uncharacterized protein LOC101206096 [Cucumis sativus]4.22e-16590.95Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSP  DRTKIANLWRFTRFIDYRCFAPPTLDF+PDSDALSRRPYRLLPRQD IDLFVLKLDGSVFG+RVSRNSTVADLKRAIE+VFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
        TWSLIWGHFCLCYEGEKL DDK CI+GY IKDGDQLQFIRHMSINCLSMKKDRKNQTVPCK +LF SPESKAVEENQADG+DD KDYQVHRDDSN+EEVA
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA

Query:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
        S+ARA FQL+N FKGRVLYSR+WGFCKSASEGRNRASSAFRI 
Subjt:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV

XP_008454172.1 PREDICTED: uncharacterized protein LOC103494657 isoform X1 [Cucumis melo]4.82e-180100Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
        TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA

Query:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
        SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
Subjt:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV

XP_008454174.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X2 [Cucumis melo]3.18e-12098.8Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFF
        TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTIL  
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFF

XP_022948349.1 uncharacterized protein LOC111452053 [Cucurbita moschata]4.73e-12073.19Show/hide
Query:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH
        +R+KI NLWRF RFID RC AP TLD + D DAL RRPYRLLPR +LIDLFVLKLDGSVFGVRV+RN TVADLK+AIEEVFDSPG SEH KITWSL+WGH
Subjt:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH

Query:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVASMARARFQ
        FCLCYEGEKL DDKA IR   IKDGDQLQFIRHMSINCL MK+DRKNQ VPCKT+LF   ESK++E NQ  G+ D  +Y+VH D SNQEE+     A FQ
Subjt:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVASMARARFQ

Query:  LSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
        L+N F+GRVLYS++WGF +SASEGRNR SS F I 
Subjt:  LSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV

XP_038904269.1 uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida]2.14e-14079.51Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPP-TLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYK
        MPT S HS+RTKI NLWRF+RF+DYRC APP TLD + D  ALSRRPYRLLPRQDLIDLFVLKLDGSVFG+RVSRN+TVADLKRAIEEVFDSPGGSEH K
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPP-TLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYK

Query:  ITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEV
        ITWSLIWGHFCLCYEGEKL DDK CIR + IKDGDQLQF+RHMSINCL +K+D KNQ+V CKT+L  SPESK+VEENQ  G+DD+++YQVHR  SNQEEV
Subjt:  ITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEV

Query:  ASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
         SM RA FQL+NFF+GRVLYSR+WGF KSASEGRNR SS FRI 
Subjt:  ASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV

TrEMBL top hitse value%identityAlignment
A0A0A0KTJ1 Ubiquitin_4 domain-containing protein2.4e-12891.32Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSP  DRTKIANLWRFTRFIDYRCFAPPTLDF+PDSDALSRRPYRLLPRQD IDLFVLKLDGSVFG+RVSRNSTVADLKRAIE+VFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
        TWSLIWGHFCLCYEGEKL DDK CI+GY IKDGDQLQFIRHMSINCLSMKKDRKNQTVPCK +LF SPESKAVEENQADG+DD KDYQVHRDDSN+EEVA
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA

Query:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRI
        S+ARA FQL+N FKGRVLYSR+WGFCKSASEGRNRASSAFRI
Subjt:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRI

A0A1S3BY00 uncharacterized protein LOC103494657 isoform X11.0e-139100Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
        TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVA

Query:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
        SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV
Subjt:  SMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRIV

A0A1S3BYS1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X21.9e-93100Show/hide
Query:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
        MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI
Subjt:  MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKI

Query:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTIL
        TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTIL
Subjt:  TWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTIL

A0A6J1DGY1 uncharacterized protein LOC111020973 isoform X15.6e-9373.91Show/hide
Query:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH
        +R+KI NLWRF RFID RC APPTLD + D DALSR PYRLLPRQDLIDLFVLKLDGSVFGVRV+RN TVA+LKRAIEEVF SPGG EH KITWSL+WGH
Subjt:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH

Query:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDY-QVHRDDSNQEEVASMARARF
        FCLCYEG+ L DDKACIR + IKDGDQLQFIRHMSI+CL +K+DRK+QTV C+T+LF  PESK VE+NQ  G DD + Y +VH D SNQEEV       F
Subjt:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDY-QVHRDDSNQEEVASMARARF

Query:  QLSNFFKGRVLYSRVWGFCKSASEGRNRAS
         L+NFF+GR LYSR+WGF KSASEGRNR S
Subjt:  QLSNFFKGRVLYSRVWGFCKSASEGRNRAS

A0A6J1G9M5 uncharacterized protein LOC1114520538.6e-9473.5Show/hide
Query:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH
        +R+KI NLWRF RFID RC AP TLD + D DAL RRPYRLLPR +LIDLFVLKLDGSVFGVRV+RN TVADLK+AIEEVFDSPG SEH KITWSL+WGH
Subjt:  DRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGH

Query:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVASMARARFQ
        FCLCYEGEKL DDKA IR   IKDGDQLQFIRHMSINCL MK+DRKNQ VPCKT+LF   ESK++E NQ  G+ D  +Y+VH D SNQEE+     A FQ
Subjt:  FCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVASMARARFQ

Query:  LSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRI
        L+N F+GRVLYS++WGF +SASEGRNR SS F I
Subjt:  LSNFFKGRVLYSRVWGFCKSASEGRNRASSAFRI

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein3.9e-1140.23Show/hide
Query:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM
        V K+DG V  V V +N+TV DLK+AI+       +  GG +H  I+WS +W  + L   GEKLT+D+  +R Y I++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein3.9e-1140.23Show/hide
Query:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM
        V K+DG V  V V +N+TV DLK+AI+       +  GG +H  I+WS +W  + L   GEKLT+D+  +R Y I++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1.5e-1039.08Show/hide
Query:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM
        V K+DG V  V V +++TV DLK+AI+       +  GG +H  I+WS +W  + L   GEKLT+D+  +R Y I++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVSRNSTVADLKRAIEEVF----DSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHM

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein7.3e-2937.5Show/hide
Query:  RRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMS
        R  Y  LP Q  I L V+KL+GS+F V V+++ +VA+LKRA+E+VF       H  I+WS +WGHFCLCY  ++L +DK  IR   + DGDQL F+RH+S
Subjt:  RRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMS

Query:  INCLSMKKDRKNQTVPCKTILFFSPESKA----VEENQADGRDDI--KDYQVHRDDSNQEEVASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRAS
        I+   M K  K+ +  CK  L     S      ++    +G DD+  K Y   +D+        +  A  +L N  KG + Y+  WG  +   E R+  S
Subjt:  INCLSMKKDRKNQTVPCKTILFFSPESKA----VEENQADGRDDI--KDYQVHRDDSNQEEVASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRAS

AT4G32270.1 Ubiquitin-like superfamily protein8.7e-2239.74Show/hide
Query:  DALSRR---PYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQL
        D L RR    Y  +P ++ I L VLKLDGS FG++V + +TV +LK A+E  F     S   KI+W  +WG FCL YE ++L ++   +  + IKDGDQL
Subjt:  DALSRR---PYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQL

Query:  QFIRHMSINCLSMKKDRKN--QTVPCKTILFFS--PESK---AVEENQADG
        +FIRH+S  C+ M K +    +    K +  FS  PE++    + E + DG
Subjt:  QFIRHMSINCLSMKKDRKN--QTVPCKTILFFS--PESK---AVEENQADG

AT4G32270.2 Ubiquitin-like superfamily protein3.4e-1839.26Show/hide
Query:  QDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKD
        ++ I L VLKLDGS F   V + +TV +LK A+E  F     S   KI+W  +WG FCL YE ++L ++   +  + IKDGDQL+FIRH+S  C+ M K 
Subjt:  QDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKD

Query:  RKN--QTVPCKTILFFS--PESK---AVEENQADG
        +    +    K +  FS  PE++    + E + DG
Subjt:  RKN--QTVPCKTILFFS--PESK---AVEENQADG

AT5G25340.1 Ubiquitin-like superfamily protein1.9e-2147.37Show/hide
Query:  YRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINC
        Y  LP +  I L VLKLDGS F V V  ++TV DLK AIE  F         KI+WS +WGHFCLC+ G+KL  D  CI  Y +KDGD+++F  H+S N 
Subjt:  YRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINC

Query:  L-----SMKKDRKN
        +     S K  +KN
Subjt:  L-----SMKKDRKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACGAGTTCTCCTCACTCCGACCGGACTAAGATCGCTAACTTATGGCGTTTCACCCGCTTCATTGATTACCGGTGTTTTGCTCCGCCGACGCTCGACTTTAATCC
TGACTCCGACGCTCTCAGTCGAAGGCCTTATCGCTTGCTTCCTCGTCAGGATCTCATCGATCTCTTCGTCTTGAAGCTCGACGGTTCTGTTTTTGGCGTTCGTGTATCAC
GTAACAGTACTGTAGCTGATCTTAAACGAGCGATAGAGGAGGTTTTTGATTCGCCCGGTGGGAGTGAACACTACAAGATTACATGGTCACTTATCTGGGGACATTTCTGC
CTATGTTATGAAGGAGAAAAACTCACTGATGACAAGGCATGCATTAGAGGTTATAGTATTAAGGATGGTGATCAGCTTCAGTTTATTAGGCATATGTCTATCAACTGTTT
ATCGATGAAGAAAGACAGGAAGAACCAAACTGTTCCTTGCAAAACAATATTGTTTTTCTCGCCAGAATCAAAAGCTGTTGAAGAGAATCAAGCAGACGGTCGAGACGATA
TCAAGGATTATCAAGTTCACAGGGACGATTCGAACCAAGAGGAGGTTGCTTCTATGGCTAGAGCTAGATTTCAGCTGTCAAATTTCTTCAAAGGACGGGTATTGTATTCC
AGGGTATGGGGTTTCTGTAAGAGTGCATCAGAAGGCAGGAATAGGGCTTCCTCTGCTTTTCGCATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCCTCTCCATTTCAAAGCTCAGAACCAAACCAACAAAACAAATTTCCCCTAAATCCCTCCATTTCTCTTCCTTTCCCATTCCCAATCCCAAACCCTAAAATCTTTCTTC
ACACCATTACAATGCCAACGAGTTCTCCTCACTCCGACCGGACTAAGATCGCTAACTTATGGCGTTTCACCCGCTTCATTGATTACCGGTGTTTTGCTCCGCCGACGCTC
GACTTTAATCCTGACTCCGACGCTCTCAGTCGAAGGCCTTATCGCTTGCTTCCTCGTCAGGATCTCATCGATCTCTTCGTCTTGAAGCTCGACGGTTCTGTTTTTGGCGT
TCGTGTATCACGTAACAGTACTGTAGCTGATCTTAAACGAGCGATAGAGGAGGTTTTTGATTCGCCCGGTGGGAGTGAACACTACAAGATTACATGGTCACTTATCTGGG
GACATTTCTGCCTATGTTATGAAGGAGAAAAACTCACTGATGACAAGGCATGCATTAGAGGTTATAGTATTAAGGATGGTGATCAGCTTCAGTTTATTAGGCATATGTCT
ATCAACTGTTTATCGATGAAGAAAGACAGGAAGAACCAAACTGTTCCTTGCAAAACAATATTGTTTTTCTCGCCAGAATCAAAAGCTGTTGAAGAGAATCAAGCAGACGG
TCGAGACGATATCAAGGATTATCAAGTTCACAGGGACGATTCGAACCAAGAGGAGGTTGCTTCTATGGCTAGAGCTAGATTTCAGCTGTCAAATTTCTTCAAAGGACGGG
TATTGTATTCCAGGGTATGGGGTTTCTGTAAGAGTGCATCAGAAGGCAGGAATAGGGCTTCCTCTGCTTTTCGCATTGTTTGAGATTGGAAATGGACATGGAATAACACA
AGCTGCAACTGCATGCAAGGTAATGAACTTAGCTAGGAACTGTAGGATTGAAACTTAAGCATTTGATTTATGAACGAGACGAGTTAGATTGGAGAGTAGGCCTAGGAGAA
AGGAAATAGAGGGAAG
Protein sequenceShow/hide protein sequence
MPTSSPHSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGSVFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFC
LCYEGEKLTDDKACIRGYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKDYQVHRDDSNQEEVASMARARFQLSNFFKGRVLYS
RVWGFCKSASEGRNRASSAFRIV