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IVF0006289 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006289
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr05:16251981..16252208
RNA-Seq ExpressionIVF0006289
SyntenyIVF0006289
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050355.1 protein Ycf2-like [Cucumis melo var. makuwa]5.26e-1879.69Show/hide
Query:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRR
        DG+R KRADDG +RRV K KRRRRRTA RWLREGSRGRAD GGDTNGGERMETAA   VGR R+
Subjt:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRR
KAA0056205.1 uncharacterized protein E6C27_scaffold431G00330 [Cucumis melo var. makuwa]1.29e-2173.97Show/hide
Query:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGGVAR
        DGRRRKRADDGC+RRV KLKRRRRRTA RWLREG RGRAD GGDTN GERMETAA     +++R    GGV+R
Subjt:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGGVAR
TrEMBL top hitse value%identityAlignment
A0A5A7U9S5 Protein Ycf2-like1.3e-1370Show/hide
Query:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGG
        DG+R KRADDG +RRV K KRRRRRTA RWLREGSRGRAD GGDTNGGERMETAA     ++++    GG
Subjt:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGG
A0A5A7URF1 RNase H domain-containing protein7.6e-1773.97Show/hide
Query:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGGVAR
        DGRRRKRADDGC+RRV KLKRRRRRTA RWLREG RGRAD GGDTN GERMETAA     +++R    GGV+R
Subjt:  DGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGGVAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCAGACGGCGCAAACGCGCGGATGATGGCTGCATTCGTCGGGTGATGAAGCTGAAGAGAAGAAGGAGAAGAACGGCGTCGCGTTGGCTTCGTGAAGGCAGTCG
AGGACGCGCGGACGAGGGTGGAGACACGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGGCTGGGGGGGTGTTGCAC
GCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCAGACGGCGCAAACGCGCGGATGATGGCTGCATTCGTCGGGTGATGAAGCTGAAGAGAAGAAGGAGAAGAACGGCGTCGCGTTGGCTTCGTGAAGGCAGTCG
AGGACGCGCGGACGAGGGTGGAGACACGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGGCTGGGGGGGTGTTGCAC
GCGGCTAG
Protein sequenceShow/hide protein sequence
MDGRRRKRADDGCIRRVMKLKRRRRRTASRWLREGSRGRADEGGDTNGGERMETAASDDVGRRRRWNGWGGVARG