CuGenDBv2

Gene ID	IVF0006300
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Lipoxygenase
Genome location	chr05:23311854..23312129
RNA-Seq Expression	IVF0006300
Synteny	IVF0006300
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0031408 - oxylipin biosynthetic process (biological process) GO:0034219 - carbohydrate transmembrane transport (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051119 - sugar transmembrane transporter activity (molecular function)
InterPro domains	IPR036392 - PLAT/LH2 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0048004.1 linoleate 9S-lipoxygenase 6-like [Cucumis melo var. makuwa]

1.58e-42

96.47

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNI+EGALNTTGDLAGSVI+AGSNIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

KGN60957.2 hypothetical protein Csa_021316 [Cucumis sativus]

1.15e-42

96.47

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNI+EGALNTTGDLAGSVINAG NIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

TYK13815.1 linoleate 9S-lipoxygenase 6-like [Cucumis melo var. makuwa]

2.66e-44

100

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

TYK13818.1 linoleate 9S-lipoxygenase 6-like [Cucumis melo var. makuwa]

2.66e-44

100

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

XP_031736489.1 linoleate 9S-lipoxygenase 6 [Cucumis sativus]

3.28e-43

97.65

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNI+EGALNTTGDLAGSVINAGSNIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFV3 Uncharacterized protein

2.7e-40

96.7

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP
        MFSIGKNI+EGALNTTGDLAGSVINAG NIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP

A0A0A0LGD7 Lipoxygenase

9.2e-41

97.8

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP
        MFSIGKNI+EGALNTTGDLAGSVINAGSNIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP

A0A5A7U194 Lipoxygenase

1.2e-35

96.47

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNI+EGALNTTGDLAGSVI+AGSNIA QISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

A0A5D3CQJ3 Lipoxygenase

3.6e-37

100

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

A0A5D3CRK6 Lipoxygenase

3.6e-37

100

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Query:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
Subjt:  MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

SwissProt top hits

e value

%identity

Alignment

P09439 Seed linoleate 9S-lipoxygenase-2

1.2e-05

42.47

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Query:  IAGQISNIGGQKIKGKVILMRSNVLDFTEFH------------------SSLLDNFTELLGGGVSLQLISATQ
        ++G ++  GG KIKG V+LMR NVLDF                       S LDN T  LG  V+LQLISAT+
Subjt:  IAGQISNIGGQKIKGKVILMRSNVLDFTEFH------------------SSLLDNFTELLGGGVSLQLISATQ

P29114 Linoleate 9S-lipoxygenase 1

1.6e-05

51.16

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Query:  KIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISAT
        ++KG V+LMR NVLD  +F ++++D   E LG GV+ QLIS+T
Subjt:  KIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISAT

Q06327 Linoleate 9S-lipoxygenase 1

4.2e-06

47.83

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Query:  QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        +K+KG V+LM+ NVLDF +F++S LD   E LG  ++L+L+S+  T
Subjt:  QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

Q43191 Probable linoleate 9S-lipoxygenase 5

1.1e-06

55.32

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Query:  SNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLIS
        S   G+K+KG ++LM+ NVLDF + ++SLLD   E LG  VSLQLIS
Subjt:  SNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLIS

Q7G794 Putative linoleate 9S-lipoxygenase 3

1.6e-05

44.83

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Query:  IAGQISNIGG----QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISAT
        + G I  I G     ++KG V+LMR NVLD  +F ++++D   E LG GV+ QLIS+T
Subjt:  IAGQISNIGG----QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISAT

Arabidopsis top hits

e value

%identity

Alignment

AT1G55020.1 lipoxygenase 1

3.0e-07

47.83

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Query:  QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT
        +K+KG V+LM+ NVLDF +F++S LD   E LG  ++L+L+S+  T
Subjt:  QKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQT

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein

1.9e-06

54.55

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Query:  KIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQ
        KI+G+V++M+ N+LDF +  +SLLD   ELLG  VSL LIS+ Q
Subjt:  KIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQ

Sequences

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CDS sequence

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ATGTTTTCAATTGGGAAGAATATCGTAGAAGGAGCTTTGAATACAACTGGGGATCTTGCAGGTTCTGTTATCAATGCTGGTAGTAACATTGCAGGCCAAATCTCCAATAT
TGGGGGACAGAAAATCAAAGGGAAAGTGATTCTTATGAGAAGTAATGTTTTGGATTTCACTGAATTCCATTCATCTCTTCTTGATAACTTCACTGAGCTATTGGGTGGTG
GTGTTTCTCTTCAACTCATTAGTGCCACTCAAACTTGTAACTTCTCTTTCCCCTAA

mRNA sequence

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Protein sequence

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MFSIGKNIVEGALNTTGDLAGSVINAGSNIAGQISNIGGQKIKGKVILMRSNVLDFTEFHSSLLDNFTELLGGGVSLQLISATQTCNFSFP

IVF0006300 (gene) of Melon (IVF77) v1 genome