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IVF0006303 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006303
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11020270..11020473
RNA-Seq ExpressionIVF0006303
SyntenyIVF0006303
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]1.53e-3794.03Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINRE++YI ELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL NQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

KAA0048149.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.40e-41100Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

TYJ98396.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.52e-3086.89Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE
        MACC L+NLIN+EM+YI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE

TYK02845.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.16e-3083.61Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE
        M CCL+HNLINREM+YI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]1.19e-3794.03Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINRE++YI ELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL NQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874734.6e-2994.03Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINRE++YI ELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL NQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

A0A5A7TA66 Retrotransposon protein4.6e-2994.03Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINRE++YI ELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQL NQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

A0A5A7U3X6 Putative nuclease HARBI17.5e-32100Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
        MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ

A0A5D3BH76 Putative nuclease HARBI11.4e-2286.89Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE
        MACC L+NLIN+EM+YI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE

A0A5D3BUR6 Putative nuclease HARBI11.2e-2183.61Show/hide
Query:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE
        M CCL+HNLINREM+YI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATGTCTTACATCGAAGAATTGGATGATGAAGACGATGGTGACTCGACACACGCAACTACTAGTGGGGACGA
CATCACATACATTGAGCCCTCAAATGAATGGACTGAATGGCGTGATGCGCTTGCTTCGTCGATGTTCACGGAATGGCAGTTGTGTAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATGTCTTACATCGAAGAATTGGATGATGAAGACGATGGTGACTCGACACACGCAACTACTAGTGGGGACGA
CATCACATACATTGAGCCCTCAAATGAATGGACTGAATGGCGTGATGCGCTTGCTTCGTCGATGTTCACGGAATGGCAGTTGTGTAATCAGTAG
Protein sequenceShow/hide protein sequence
MACCLLHNLINREMSYIEELDDEDDGDSTHATTSGDDITYIEPSNEWTEWRDALASSMFTEWQLCNQ