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IVF0006315 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006315
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:7370509..7370928
RNA-Seq ExpressionIVF0006315
SyntenyIVF0006315
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]2.47e-5871.74Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        ++SHPAAK LLNKLFSYYDELAYVF  DRATG+F ETF DI SNE AGYEGFDMSD ND+EFPFMYSQ I +SQDDVR S+P   SD R  SS SKRKR 
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV
        SQ EGE+++I+MAL+C NDQLRTI+EW  R  AN+T V
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV

KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa]3.14e-5266.91Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        MQSHP AKGLLNK F YYDELAY+F RDR T +F ETF DI SNE   YEGF+MSD N+ EF  +YSQ I MSQ+DV AS+P   S+SR  SS  KRKR 
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
        SQ +GEI++IHMAL+C NDQL+ IVEW ARALAN+T VH
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH

KAA0055946.1 retrotransposon protein [Cucumis melo var. makuwa]1.41e-93100Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
        SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH

KAA0067019.1 retrotransposon protein [Cucumis melo var. makuwa]1.37e-5867.39Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        MQ+HP AKGLLNK FSYYDELAYVF RDR  G F ETF+D+ SN+ + YEGF  +D ND EFP MYSQ   MSQDDVRAS P   S+ RTGS+GSK++RE
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV
         QW GEIEMIH ALEC NDQLR I EW +R L N+TT+
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV

XP_016900897.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo]5.80e-7499.12Show/hide
Query:  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRESQWEGEIEMIHMALECANDQLRTIV
        RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSK+KRESQWEGEIEMIHMALECANDQLRTIV
Subjt:  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRESQWEGEIEMIHMALECANDQLRTIV

Query:  EWSARALANDTTVH
        EWSARALANDTTVH
Subjt:  EWSARALANDTTVH

TrEMBL top hitse value%identityAlignment
A0A1S4DY48 uncharacterized protein LOC1034919609.1e-5699.12Show/hide
Query:  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRESQWEGEIEMIHMALECANDQLRTIV
        RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSK+KRESQWEGEIEMIHMALECANDQLRTIV
Subjt:  RRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRESQWEGEIEMIHMALECANDQLRTIV

Query:  EWSARALANDTTVH
        EWSARALANDTTVH
Subjt:  EWSARALANDTTVH

A0A5A7UWV7 Retrotransposon protein1.1e-4068.89Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        ++SHPAAK LLNK F YYDEL YVF RDRA G FA+TF D+ SNE  GYEGFDM+D N+ EFP +YSQ I MSQDDVRASRP   S  RTGSSGSKRKRE
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALAND
        SQ E ++E IH+AL+  N+QLR IVEW AR+ AND
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALAND

A0A5D3BQI7 Retrotransposon protein2.9e-4671.74Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        ++SHPAAK LLNKLFSYYDELAYVF  DRATG+F ETF DI SNE AGYEGFDMSD ND+EFPFMYSQ I +SQDDVR S+P   SD R  SS SKRKR 
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV
        SQ EGE+++I+MAL+C NDQLRTI+EW  R  AN+T V
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV

A0A5D3DS68 Retrotransposon protein4.2e-4567.39Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        MQ+HP AKGLLNK FSYYDELAYVF RDR  G F ETF+D+ SN+ + YEGF  +D ND EFP MYSQ   MSQDDVRAS P   S+ RTGS+GSK++RE
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV
         QW GEIEMIH ALEC NDQLR I EW +R L N+TT+
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTV

A0A5D3DXB2 Retrotransposon protein1.5e-71100Show/hide
Query:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
        MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE
Subjt:  MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRE

Query:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
        SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH
Subjt:  SQWEGEIEMIHMALECANDQLRTIVEWSARALANDTTVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGCATCCTGCAGCGAAAGGCCTCCTTAACAAACTGTTTTCCTATTACGATGAACTTGCATATGTGTTCAGGAGAGATAGGGCGACAGGTCAGTTTGCAGAGAC
ATTCGTCGACATCGAGTCTAATGAGCTTGCCGGGTACGAGGGGTTTGACATGTCGGATGAAAATGATATGGAGTTTCCATTCATGTATAGCCAGAGGATTGTCATGTCTC
AAGATGATGTACGCGCCTCACGACCTTATAGCGTGTCCGATAGTAGAACCGGATCGAGCGGATCCAAGCGAAAGAGGGAAAGCCAGTGGGAGGGTGAGATTGAGATGATA
CATATGGCGCTGGAGTGTGCGAATGACCAATTGAGGACCATTGTAGAGTGGTCTGCGCGTGCCCTTGCCAATGACACCACAGTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGCATCCTGCAGCGAAAGGCCTCCTTAACAAACTGTTTTCCTATTACGATGAACTTGCATATGTGTTCAGGAGAGATAGGGCGACAGGTCAGTTTGCAGAGAC
ATTCGTCGACATCGAGTCTAATGAGCTTGCCGGGTACGAGGGGTTTGACATGTCGGATGAAAATGATATGGAGTTTCCATTCATGTATAGCCAGAGGATTGTCATGTCTC
AAGATGATGTACGCGCCTCACGACCTTATAGCGTGTCCGATAGTAGAACCGGATCGAGCGGATCCAAGCGAAAGAGGGAAAGCCAGTGGGAGGGTGAGATTGAGATGATA
CATATGGCGCTGGAGTGTGCGAATGACCAATTGAGGACCATTGTAGAGTGGTCTGCGCGTGCCCTTGCCAATGACACCACAGTTCATTAA
Protein sequenceShow/hide protein sequence
MQSHPAAKGLLNKLFSYYDELAYVFRRDRATGQFAETFVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKRKRESQWEGEIEMI
HMALECANDQLRTIVEWSARALANDTTVH