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IVF0006343 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006343
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAuxin-responsive protein
Genome locationchr04:3168951..3169345
RNA-Seq ExpressionIVF0006343
SyntenyIVF0006343
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031798.1 Auxin-responsive protein IAA29 [Cucurbita argyrosperma subsp. argyrosperma]8.59e-1569.09Show/hide
Query:  KASSMQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        K SSM+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  KASSMQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
XP_022940237.1 auxin-responsive protein IAA29-like isoform X2 [Cucurbita moschata]4.75e-1368.63Show/hide
Query:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        M+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
XP_022982033.1 auxin-responsive protein IAA29-like isoform X3 [Cucurbita maxima]6.59e-1368.63Show/hide
Query:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        M+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
XP_023524314.1 auxin-responsive protein IAA29-like isoform X2 [Cucurbita pepo subsp. pepo]6.59e-1368.63Show/hide
Query:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        M+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
TrEMBL top hitse value%identityAlignment
A0A6J1FJ11 Auxin-responsive protein7.7e-1068.63Show/hide
Query:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        M+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
A0A6J1J3R3 Auxin-responsive protein1.0e-0968.63Show/hide
Query:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
        M+AST TRPIQS+  LQWPL AE+ S +A++  VTWTSI LAR VLDNFLP
Subjt:  MQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGATCGAGCTGTACAATATGCTTCCCCTGCAAATGCCAGCTTTTCATGTCAGTTACATCTCTTTTGGGGTCTACAAGGCTTCATCCATGCAGGCTTCGAC
ATTGACACGACCAATTCAATCGATTTCGTCCCTCCAATGGCCGCTCGCTGCCGAGAACATCAGTTTAATTGCCCTAATTTTTGATGTCACGTGGACTTCAATTGAACTTG
CCCGCTCGGTTCTAGACAATTTCTTGCCCTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATGATTCGATTGTAAAAGATAAAGGAAAAGAATTTGATGTTCATGTGATCTCTTCAGAATATTTTGATGAAAATTCTGATTACATTTTACATAATATTCGTTTTC
TTTTAAGGCTTTCAAAAATGTGTAAGAAAATCAATGGCGGATTGGATCGAGCTGTACAATATGCTTCCCCTGCAAATGCCAGCTTTTCATGTCAGTTACATCTCTTTTGG
GGTCTACAAGGCTTCATCCATGCAGGCTTCGACATTGACACGACCAATTCAATCGATTTCGTCCCTCCAATGGCCGCTCGCTGCCGAGAACATCAGTTTAATTGCCCTAA
TTTTTGATGTCACGTGGACTTCAATTGAACTTGCCCGCTCGGTTCTAGACAATTTCTTGCCCTGA
Protein sequenceShow/hide protein sequence
MADWIELYNMLPLQMPAFHVSYISFGVYKASSMQASTLTRPIQSISSLQWPLAAENISLIALIFDVTWTSIELARSVLDNFLP