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IVF0006361 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006361
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:22114013..22114270
RNA-Seq ExpressionIVF0006361
SyntenyIVF0006361
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046626.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]8.95e-2360.53Show/hide
Query:  EGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV
        EG+ST R  +L+ +NY +WK +MI+F KSID+K WK +ITR+EHP  KDV GKVT KPEISWS  E E SL NS+ 
Subjt:  EGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV

KAA0054815.1 Receptor-like protein 12 [Cucumis melo var. makuwa]2.08e-2254.43Show/hide
Query:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS
        M+  HEG+ST RLP+L+G NY +WKARMIAFLK +D+K WK ++T +E    KD  GK+  K EI+W+  E E SL NS
Subjt:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS

KAA0060245.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.94e-2463.64Show/hide
Query:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV
        HEG+ST RL +L+G NYA WKARMI FLKSID+K WK +I  +EH   KD   KVT KP+ISWS  E EASL NSR 
Subjt:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV

TYJ99644.1 Receptor-like protein 12 [Cucumis melo var. makuwa]2.54e-2355.7Show/hide
Query:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS
        M+  HEG+ST RLP+L+G NY +WKARMIAFLKS+D+K WK ++T +E    KD  GK+  K EI+W+  E E SL NS
Subjt:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS

TYK21554.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.22e-2463.64Show/hide
Query:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV
        HEG+ST RL +L+G NYA WKARMI FLKSID+K WK +I  +EH   KD   KVT KP+ISWS  E EASL NSR 
Subjt:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV

TrEMBL top hitse value%identityAlignment
A0A5A7TXB8 Gag-proteinase polyprotein6.0e-1861.33Show/hide
Query:  EGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR
        EG+ST R  +L+ +NY +WK +MI+F KSID+K WK +ITR+EHP  KDV GKVT KPEISWS  E E SL NS+
Subjt:  EGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR

A0A5A7V2Z3 Gag-pol polyprotein2.1e-1864.47Show/hide
Query:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR
        HEG+ST RL +L+G NYA WKARMI FLKSID+K WK +I  +EH   KD   KVT KP+ISWS  E EASL NSR
Subjt:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR

A0A5D3BKV1 Receptor-like protein 126.6e-1755.7Show/hide
Query:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS
        M+  HEG+ST RLP+L+G NY +WKARMIAFLKS+D+K WK ++T +E    KD  GK+  K EI+W+  E E SL NS
Subjt:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENS

A0A5D3D4I7 Gag-pol polyprotein1.7e-1759.26Show/hide
Query:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV
        ME   EGSST R P+ +G N+A+ KARMI FLKSID+K+WK ++T +EH  + D +GK++ KPEIS SN E EASL NSRV
Subjt:  MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRV

A0A5D3DD91 Gag-pol polyprotein2.1e-1864.47Show/hide
Query:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR
        HEG+ST RL +L+G NYA WKARMI FLKSID+K WK +I  +EH   KD   KVT KP+ISWS  E EASL NSR
Subjt:  HEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTAGGCATGAAGGAAGCTCGACTCCACGACTTCCAGTTTTGAATGGATCGAATTATGCATTTTGGAAAGCTAGGATGATTGCCTTCTTAAAATCAATTGACAA
CAAGTCTTGGAAGACTATTATTACTAGGTATGAACATCCTATTGTGAAAGATGTTGATGGTAAGGTTACTCAAAAGCCAGAAATCTCTTGGTCAAATACAGAGGGTGAAG
CCTCTCTTGAAAATTCTCGTGTTGAAATGGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTAGGCATGAAGGAAGCTCGACTCCACGACTTCCAGTTTTGAATGGATCGAATTATGCATTTTGGAAAGCTAGGATGATTGCCTTCTTAAAATCAATTGACAA
CAAGTCTTGGAAGACTATTATTACTAGGTATGAACATCCTATTGTGAAAGATGTTGATGGTAAGGTTACTCAAAAGCCAGAAATCTCTTGGTCAAATACAGAGGGTGAAG
CCTCTCTTGAAAATTCTCGTGTTGAAATGGAATTTTAA
Protein sequenceShow/hide protein sequence
MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRVEMEF