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IVF0006362 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006362
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncalmodulin-like
Genome locationchr07:2321099..2321785
RNA-Seq ExpressionIVF0006362
SyntenyIVF0006362
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]7.26e-58100Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.33e-4179.55Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYT
        M+R+SKTY PR +LSREQL +IFRNHD D DGRLSTTELT AFRYIGAFLP YRA HAL H DSD DGFI EKDFELLVNYAE+R+YT
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYT

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.04e-3972.22Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        M R++KTYHPR R+SREQL LIFRNHD + DGRLS+ ELT+AF YIGA LP +RA HAL + DSDRDGFI EKDFE L++YAE+RQYTVI
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.90e-4480Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        M+R+SKTY PR +LSREQL +IFRNHD D DGRLSTTELT AFRYIGAFLP YRA HAL H DSD DGFI EKDFELLVNYAE+R+YTVI
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]1.86e-5190Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        MSR+SK Y+PRA+LSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHAL HADSDRDGFI EKDFE LVNYAEQRQYT+I
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein2.5e-3890Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        MSR+SK Y+PRA+LSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHAL HADSDRDGFI EKDFE LVNYAEQRQYT+I
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

A0A5A7UYC0 Putative calcium-binding protein CML106.8e-1246.75Show/hide
Query:  RARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQY
        + +LSRE +  IFR HD D DGRLS +E+ +AF + G+ LP Y+A + + HAD + DG+I E++ + LV+YAE+ Q+
Subjt:  RARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQY

A0A5A7VDB9 Putative calcium-binding protein CML273.3e-43100Show/hide
Query:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
        MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI
Subjt:  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI

A0A5C7H618 Uncharacterized protein1.8e-1252.7Show/hide
Query:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYA
        HP    + +QL  IFR  D+D DGRLS  ELT+AF  +G+  P YRA  AL HAD+++DGF+SE +F+ LV YA
Subjt:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYA

A5AWP8 Uncharacterized protein2.3e-1246.43Show/hide
Query:  KTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTV
        KT   ++ L  +QL  IF+ HD++ DG+L+  EL +AF+++GA +P +RA  AL HAD+D DG ISEK+ + LV YA +  YT+
Subjt:  KTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTV

SwissProt top hitse value%identityAlignment
O81701 Polcalcin Aln g 43.8e-0434.33Show/hide
Query:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF
        HP+ +   E+   IF+  D++ DG++S +EL +A + +G+ + P   +H +   D+D DGFIS ++F
Subjt:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF

Q39419 Polcalcin Bet v 41.6e-0537.31Show/hide
Query:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF
        HP+ +  RE+   IF+  D++ DG++S  EL EA + +G+ + P   +H +   D+D DGFIS ++F
Subjt:  HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF

Q6L4D4 Probable calcium-binding protein CML152.9e-0434.85Show/hide
Query:  PRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF
        PR   + ++   +FR  D++ DGR+S  EL   FR +G  +        +  ADSD DG+IS  +F
Subjt:  PRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF

Q8L3R2 Probable calcium-binding protein CML411.0e-0436.07Show/hide
Query:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +  +DF
Subjt:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF

Q9S744 Calmodulin-like protein 95.0e-0434.92Show/hide
Query:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV
        ++L+ +FR  D D DG +S  EL E  + +G  +    A H +  AD D DGF+S  +F  ++
Subjt:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein3.9e-0432.76Show/hide
Query:  IFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV
        +F   D+++DGR+S  EL ++F+ +G  +    A  A+  +D D DG +   +F LL+
Subjt:  IFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV

AT1G76650.1 calmodulin-like 385.2e-0428.99Show/hide
Query:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQ

AT1G76650.3 calmodulin-like 385.2e-0428.99Show/hide
Query:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQ

AT3G50770.1 calmodulin-like 417.2e-0636.07Show/hide
Query:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +  +DF
Subjt:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDF

AT3G51920.1 calmodulin 93.6e-0534.92Show/hide
Query:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV
        ++L+ +FR  D D DG +S  EL E  + +G  +    A H +  AD D DGF+S  +F  ++
Subjt:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGAAGAAGCAAAACCTACCACCCAAGAGCAAGGCTATCAAGAGAACAGTTGCTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTGAGCACCAC
CGAGCTCACTGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGCCCTACCGAGCTCGCCACGCTCTTTTTCATGCCGACTCCGACAGAGATGGATTCATCAGCGAGAAGG
ATTTCGAATTACTTGTTAATTATGCTGAGCAACGCCAATATACCGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
CTACACTTCAAAAGCTTTTTACAAGCAAATAGGGAGAGCAAAAGAAAAAAAAAGGAAGAATTGTAGGGATAAAAATGTCGAGAAGAAGCAAAACCTACCACCCAAGAGCA
AGGCTATCAAGAGAACAGTTGCTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTGAGCACCACCGAGCTCACTGAAGCCTTCCGATATATCGGCGCCTT
TCTCCCGCCCTACCGAGCTCGCCACGCTCTTTTTCATGCCGACTCCGACAGAGATGGATTCATCAGCGAGAAGGATTTCGAATTACTTGTTAATTATGCTGAGCAACGCC
AATATACCGTCATTTGATTTTCTTTTACCTTTTCTTTTCTTTTTTGGGTTTCCTTTTCCATTTACGATATAAGGTTTAATGATCTCAGTCTATAATCTGTGGGACGTACC
CGTAAGATCAAAGATGAAAATCATGTGTGATCAAGATTATATATGATTTTTCATATTTTACTATACGATCAACAAATTATACTCGAGATCGAGAAACTATTACTAATAAC
TGCTTGTGAGTGTTTAGGGTCAAGTTCAAATTACCTTCATTTCCATTTGTTCTAATCAAAAACTGCTTATAGTTACTGTTCTTTCTTTCTTTCTTTTTTAAATAAAGGAT
ACTTTCTTGTTGTAAACTGCTTATATA
Protein sequenceShow/hide protein sequence
MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALFHADSDRDGFISEKDFELLVNYAEQRQYTVI