; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006437 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006437
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr11:6351225..6352657
RNA-Seq ExpressionIVF0006437
SyntenyIVF0006437
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.39e-5650.59Show/hide
Query:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKT-------------------------
        NCVLA ENEKLREEVKKWVQQ VN  RDLD+ KRKRLELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+A+                          
Subjt:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKT-------------------------

Query:  --------------------------------------------------------------------------------DEYETLRRKYDYAIGRMERG
                                                                                        DEYETLRRKYD AI RMERG
Subjt:  --------------------------------------------------------------------------------DEYETLRRKYDYAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH
        AEKLRQMA VADQFSVQARTLRQGVIPTRD + ELS+FLGIIGQ LG FGCYH
Subjt:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH

KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.67e-10966.78Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM
        M ETFRSLNHCRIQ                                                +FQPFND+R NLESPLDAHKSFD PLWKIG+YPTIRLM
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM

Query:  GG-IAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDK
        GG IAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIANNKIHEAV+AWKFVKK+KSLRHCE                      ESLVPNIELKK HDK
Subjt:  GG-IAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDK

Query:  EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYE
        EKELKRLRE NCV+A ENEKLREEVKKWVQQ VNT RDLD+ KRK LELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+AK    E
Subjt:  EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYE

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]4.42e-12863.73Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM
        MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYP NFGY QIKF+S WN TRNTIREFN                 AH     P  + G Y      
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM

Query:  GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDKE
        GGIAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIAN+KIHEAV+AWKFVKK+KSLRHCE                      ESLVPNIELKK HDKE
Subjt:  GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDKE

Query:  KELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLE----------------------------LEKENNSLNTEAIQVRKKNKRLLRN
        KELKRLRE NCVLA ENEKLREEVKKWVQQ VNT RDLD+ KRKRLE                            L+K  NS  ++ +  RK  + +  +
Subjt:  KELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLE----------------------------LEKENNSLNTEAIQVRKKNKRLLRN

Query:  IANLHKEIKAKT-------DEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLG
         A L ++ +  +       DEYETLRRKYD AIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDT++ELS+FLGIIGQ LG
Subjt:  IANLHKEIKAKT-------DEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLG

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.07e-6052.17Show/hide
Query:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKT-------------------------
        NCVLA ENEKLREEVKKWVQQ VNT RDLD+ KRKRLELEKEN+SLNTEAIQ+RKKNKRLLRNIANLH+EI+AK                          
Subjt:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKT-------------------------

Query:  --------------------------------------------------------------------------------DEYETLRRKYDYAIGRMERG
                                                                                        DEYETLRRKYD AIGRMERG
Subjt:  --------------------------------------------------------------------------------DEYETLRRKYDYAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH
        AEKLRQMARVADQFSVQARTLRQGVIPTRDT++ELS+FLGIIGQ LG FGCYH
Subjt:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.39e-12169.51Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFN------------IFQPFNDSRSNLESPLDAHKSFDIPL
        M ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYP NFGY QIKFSS WNNTRNTIREFN            ++  F    + +++   A      PL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFN------------IFQPFNDSRSNLESPLDAHKSFDIPL

Query:  W-KIGFYPTIRLMG----GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE---------------------
          + G    I L+G    GIAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIANNKIHEAV+AWKFVKK+KSLRHCE                     
Subjt:  W-KIGFYPTIRLMG----GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE---------------------

Query:  -ESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK
         ESLVPNIELKK HDKEKELKRLRE NCV+A ENEKLREEVKKWVQQ VNT RDLD+ KRK LELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+AK
Subjt:  -ESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK

Query:  TDEYE
            E
Subjt:  TDEYE

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like2.4e-4650.59Show/hide
Query:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK--------------------------
        NCVLA ENEKLREEVKKWVQQ VN  RDLD+ KRKRLELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+A+                          
Subjt:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK--------------------------

Query:  -------------------------------------------------------------------------------TDEYETLRRKYDYAIGRMERG
                                                                                        DEYETLRRKYD AI RMERG
Subjt:  -------------------------------------------------------------------------------TDEYETLRRKYDYAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH
        AEKLRQMA VADQFSVQARTLRQGVIPTRD + ELS+FLGIIGQ LG FGCYH
Subjt:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH

A0A5A7SNY0 Glial fibrillary acidic protein-like1.1e-9166.78Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM
        M ETFRSLNHCRIQ                                                +FQPFND+R NLESPLDAHKSFD PLWKIG+YPTIRLM
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM

Query:  -GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDK
         GGIAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIANNKIHEAV+AWKFVKK+KSLRHCE                      ESLVPNIELKK HDK
Subjt:  -GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDK

Query:  EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYE
        EKELKRLRE NCV+A ENEKLREEVKKWVQQ VNT RDLD+ KRK LELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+AK    E
Subjt:  EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYE

A0A5A7SUT0 Reverse transcriptase1.2e-11463.73Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM
        MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYP NFGY QIKF+S WN TRNTIREFN                 AH     P  + G Y      
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM

Query:  GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDKE
        GGIAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIAN+KIHEAV+AWKFVKK+KSLRHCE                      ESLVPNIELKK HDKE
Subjt:  GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE----------------------ESLVPNIELKKSHDKE

Query:  KELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLE----------------------------LEKENNSLNTEAIQVRKKNKRLLRN
        KELKRLRE NCVLA ENEKLREEVKKWVQQ VNT RDLD+ KRKRLE                            L+K  NS  ++ +  RK  + +  +
Subjt:  KELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLE----------------------------LEKENNSLNTEAIQVRKKNKRLLRN

Query:  IANLHKEIKAKT-------DEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLG
         A L ++ +  +       DEYETLRRKYD AIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDT++ELS+FLGIIGQ LG
Subjt:  IANLHKEIKAKT-------DEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLG

A0A5A7VDD9 Glial fibrillary acidic protein-like1.1e-4952.17Show/hide
Query:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK--------------------------
        NCVLA ENEKLREEVKKWVQQ VNT RDLD+ KRKRLELEKEN+SLNTEAIQ+RKKNKRLLRNIANLH+EI+AK                          
Subjt:  NCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK--------------------------

Query:  -------------------------------------------------------------------------------TDEYETLRRKYDYAIGRMERG
                                                                                        DEYETLRRKYD AIGRMERG
Subjt:  -------------------------------------------------------------------------------TDEYETLRRKYDYAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH
        AEKLRQMARVADQFSVQARTLRQGVIPTRDT++ELS+FLGIIGQ LG FGCYH
Subjt:  AEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH

A0A5D3D0S2 Glial fibrillary acidic protein-like2.4e-10269.51Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFN------------IFQPFNDSRSNLESPLDAHKSFDIPL
        M ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYP NFGY QIKFSS WNNTRNTIREFN            ++  F    + +++   A      PL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFN------------IFQPFNDSRSNLESPLDAHKSFDIPL

Query:  -WKIGFYPTIRLM----GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE---------------------
          + G    I L+    GGIAYSPLLVLRQSWSKQFAPVVC LEDWEFSYESNIANNKIHEAV+AWKFVKK+KSLRHCE                     
Subjt:  -WKIGFYPTIRLM----GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCE---------------------

Query:  -ESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK
         ESLVPNIELKK HDKEKELKRLRE NCV+A ENEKLREEVKKWVQQ VNT RDLD+ KRK LELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+AK
Subjt:  -ESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAK

Query:  TDEYE
            E
Subjt:  TDEYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGACTTTTAGATCGCTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGGTATCC
TATTAATTTTGGATATTCTCAAATAAAATTCAGCAGTCTGTGGAATAATACAAGAAACACTATTAGAGAATTCAATATTTTTCAGCCATTTAACGATAGTAGAAGCAATT
TGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCCCACTATTAGGCTTATGGGGGGCATTGCTTATTCTCCTCTTTTGGTA
CTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTAGGCTAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCAA
GGCATGGAAATTTGTAAAGAAGATTAAGAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAAACATAGAATTGAAGAAATCTCATGATAAAGAAAAGGAATTAAAGCGAT
TAAGAGAAACGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGTTGTTAATACTCTAAGAGATTTAGACAAGGTGAAA
CGAAAGCGATTAGAGTTGGAGAAGGAAAACAATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATAAAGA
GATAAAAGCTAAAACGGACGAGTACGAGACATTGAGACGAAAGTATGATTATGCTATAGGTCGGATGGAACGAGGGGCGGAAAAATTAAGACAAATGGCAAGGGTGGCAG
ATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCAATAGAGAATTGTCTAATTTTCTAGGAATCATAGGGCAGTACCTCGGATGT
TTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGACTTTTAGATCGCTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGGTATCC
TATTAATTTTGGATATTCTCAAATAAAATTCAGCAGTCTGTGGAATAATACAAGAAACACTATTAGAGAATTCAATATTTTTCAGCCATTTAACGATAGTAGAAGCAATT
TGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCCCACTATTAGGCTTATGGGGGGCATTGCTTATTCTCCTCTTTTGGTA
CTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTAGGCTAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCAA
GGCATGGAAATTTGTAAAGAAGATTAAGAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAAACATAGAATTGAAGAAATCTCATGATAAAGAAAAGGAATTAAAGCGAT
TAAGAGAAACGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGTTGTTAATACTCTAAGAGATTTAGACAAGGTGAAA
CGAAAGCGATTAGAGTTGGAGAAGGAAAACAATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATAAAGA
GATAAAAGCTAAAACGGACGAGTACGAGACATTGAGACGAAAGTATGATTATGCTATAGGTCGGATGGAACGAGGGGCGGAAAAATTAAGACAAATGGCAAGGGTGGCAG
ATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCAATAGAGAATTGTCTAATTTTCTAGGAATCATAGGGCAGTACCTCGGATGT
TTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNIFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMGGIAYSPLLV
LRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK
RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGC
FGCYH