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IVF0006528 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006528
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-protease polyprotein
Genome locationchr11:5081117..5081377
RNA-Seq ExpressionIVF0006528
SyntenyIVF0006528
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032057.1 gag-protease polyprotein [Cucumis melo var. makuwa]2.17e-52100Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY
        MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY

TYK13653.1 gag-protease polyprotein [Cucumis melo var. makuwa]2.84e-2864.71Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        M+VE+YDQ+FN+LSHF+ K  DTEQA++ERFV GL NEI+GF+ AFK A  AEAL L VD+ IQGDDI+PKR D  TSS Q +K 
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

XP_031736733.1 uncharacterized protein LOC116402075 [Cucumis sativus]1.61e-2767.06Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YDQEF+MLS FA +LV  EQAR+ERFV GL++EI GFVRA KP   AEALRL VD+SI  D+IQ +  D  TSSGQK+KA
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

XP_031744130.1 uncharacterized protein LOC116404793 isoform X1 [Cucumis sativus]9.90e-2965.88Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YDQEF+MLS FA +LV  EQAR++RFV GL++EI GFVRA KP   AEALRL VD+SI  D+IQP+ FD  +SSGQK+K 
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

XP_031744134.1 uncharacterized protein LOC116404793 isoform X2 [Cucumis sativus]9.41e-2965.88Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YDQEF+MLS FA +LV  EQAR++RFV GL++EI GFVRA KP   AEALRL VD+SI  D+IQP+ FD  +SSGQK+K 
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

TrEMBL top hitse value%identityAlignment
A0A5A7SSA3 Reverse transcriptase7.4e-1655.29Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YD EF+MLSHFA +++ TE AR+++FV GL+ +I+G VRAF+PA  A+ALRL VDLS+Q      K     ++SGQK+KA
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

A0A5A7TB42 Reverse transcriptase7.4e-1655.29Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YD EF+MLSHFA +++ TE AR+++FV GL+ +I+G VRAF+PA  A+ALRL VDLS+Q      K     ++SGQK+KA
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

A0A5A7TK90 Reverse transcriptase9.7e-1655.29Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA
        MTVE+YD EF+MLS FA +++ TE AR+++FV GL+ +I+GFVRAF+PA  A+ALRL VDLS+Q      K     ++SGQK+KA
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKA

A0A5D3CP21 Gag-protease polyprotein7.7e-2165.48Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKK
        M+VE+YDQ+FN+LSHF+ K  DTEQA++ERFV GL NEI+GF+ AFK A  AEAL L VD+ IQGDDI+PKR D  TSS Q +K
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKK

A0A5D3CQ98 Gag-protease polyprotein2.1e-39100Show/hide
Query:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY
        MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY
Subjt:  MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTAGAAAAGTATGACCAAGAATTCAATATGCTATCGCATTTTGCTTCTAAATTAGTGGACACTGAGCAAGCCAGATCAGAGAGGTTTGTTGGAGGTTTGAAGAA
TGAGATTGAAGGTTTTGTGCGAGCATTTAAGCCAGCTAATTTGGCTGAAGCACTGCGCTTGGTAGTGGACTTGAGTATTCAGGGAGATGATATTCAACCAAAGAGATTTG
ACAACGAAACATCATCTGGGCAGAAGAAAAAAGCATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGTAGAAAAGTATGACCAAGAATTCAATATGCTATCGCATTTTGCTTCTAAATTAGTGGACACTGAGCAAGCCAGATCAGAGAGGTTTGTTGGAGGTTTGAAGAA
TGAGATTGAAGGTTTTGTGCGAGCATTTAAGCCAGCTAATTTGGCTGAAGCACTGCGCTTGGTAGTGGACTTGAGTATTCAGGGAGATGATATTCAACCAAAGAGATTTG
ACAACGAAACATCATCTGGGCAGAAGAAAAAAGCATATTAG
Protein sequenceShow/hide protein sequence
MTVEKYDQEFNMLSHFASKLVDTEQARSERFVGGLKNEIEGFVRAFKPANLAEALRLVVDLSIQGDDIQPKRFDNETSSGQKKKAY