; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006529 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006529
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L35-like
Genome locationchr10:5493467..5495008
RNA-Seq ExpressionIVF0006529
SyntenyIVF0006529
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062216.1 60S ribosomal protein L35-like [Cucumis melo var. makuwa]4.24e-70100Show/hide
Query:  ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES
        ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES
Subjt:  ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES

Query:  LKTERQKKKEMYYPLRKYAIK
        LKTERQKKKEMYYPLRKYAIK
Subjt:  LKTERQKKKEMYYPLRKYAIK

XP_004150961.1 60S ribosomal protein L35 [Cucumis sativus]3.71e-7199.19Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_008461617.1 PREDICTED: 60S ribosomal protein L35-like [Cucumis melo]4.51e-72100Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_022139337.1 60S ribosomal protein L35-2 [Momordica charantia]1.24e-6997.56Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_038891782.1 60S ribosomal protein L35-like [Benincasa hispida]4.33e-7097.56Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A0A0KLK6 Uncharacterized protein6.4e-5399.19Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A1S3CF13 60S ribosomal protein L35-like1.3e-53100Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A5A7V711 60S ribosomal protein L35-like1.4e-52100Show/hide
Query:  ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES
        ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES
Subjt:  ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQES

Query:  LKTERQKKKEMYYPLRKYAIK
        LKTERQKKKEMYYPLRKYAIK
Subjt:  LKTERQKKKEMYYPLRKYAIK

A0A6J1BZV3 60S ribosomal protein L352.7e-5196.75Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMY+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1CDN9 60S ribosomal protein L35-29.2e-5297.56Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-21.1e-4989.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-47.0e-4989.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-33.5e-4887.8Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L355.7e-5191.06Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELRQK+K +LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ+
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-13.1e-4989.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein7.7e-5189.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein2.2e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein2.5e-4987.8Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein2.5e-4987.8Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein5.0e-5089.43Show/hide
Query:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE
        MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQE

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAATTAAGGTTCATGAGCTTAGACAAAAGTCGAAGGGGGATCTTTTAGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTCCTCCGTGTCGCTAAGGTCAC
TGGTGGTGCTCCTAACAAGCTTTCCAAAATTAAGGTAGTGAGGTTGTCTATCGCTCAGGTGTTGACAGTGATTTCTCAGAAGCAGAAGGCTGCTCTTAGGGAAGCTTACA
AGAAGAAGAAACTTTTGCCTCTTGATTTGCGCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGAATCTCTAAAGACGGAGCGACAGAAGAAGAAA
GAGATGTACTACCCACTGAGGAAGTATGCCATTAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCAACCTAGGGTTTTGAAGACCACCGCCGAATCCCAAAACTCAACTCCCGGTCTCTGCTTAACAGATTCTAATGGCGAGAATTAAGGTTCATGAGCTTAGACAA
AAGTCGAAGGGGGATCTTTTAGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTCCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTTTCCAAAATTAA
GGTAGTGAGGTTGTCTATCGCTCAGGTGTTGACAGTGATTTCTCAGAAGCAGAAGGCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAACTTTTGCCTCTTGATTTGCGCC
CAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGAATCTCTAAAGACGGAGCGACAGAAGAAGAAAGAGATGTACTACCCACTGAGGAAGTATGCCATT
AAGGTGTAGGCTTAGAGAGAATTGATTGATGATCCTCCGTGGTATCATGCATCTTCTACTCATTTTGGCTTTTGATTTATCTATAACTTTATTCAGACTTGAGTGCCTAT
TTTCAATCTTATTGTTAGATCTTTGAACTTTGAAGTCTTTCCTTTCTTTCCATGTAATACTTTAGTTTCTCAAGTTATAATGAAATGGTTTTGGTTAATGACCTTAGGCA
GCTCTATCTTTTGCTAAGTTGAATGTGCTCTGATTTTAAACCATAGGCAGCT
Protein sequenceShow/hide protein sequence
MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKK
EMYYPLRKYAIKV