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IVF0006545 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006545
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:8705411..8705578
RNA-Seq ExpressionIVF0006545
SyntenyIVF0006545
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]3.61e-2987.27Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYC+D++DVDEGDS YATTTASEDIHYIETTNEWSQW DEL +SMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
KAA0062745.1 retrotransposon protein [Cucumis melo var. makuwa]8.41e-2885.45Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYC+DV++VDEGDSTYATT A+EDIHYI+TTNEWSQWHDEL++SMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
KAA0063861.1 retrotransposon protein [Cucumis melo var. makuwa]1.95e-30100Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
KAA0066806.1 retrotransposon protein [Cucumis melo var. makuwa]1.10e-2792.73Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDV+DVDEGDSTYATTTASEDIHYIETTNEWSQW DELV+SMFTDWQL NA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
TYJ95515.1 retrotransposon protein [Cucumis melo var. makuwa]3.37e-31100Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7VDR4 Retrotransposon protein3.6e-24100Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
A0A5A7VK86 Retrotransposon protein1.3e-2192.73Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDV+DVDEGDSTYATTTASEDIHYIETTNEWSQW DELV+SMFTDWQL NA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
A0A5D3BAK8 Retrotransposon protein3.6e-24100Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein1.1e-2087.27Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYC+D++DVDEGDS YATTTASEDIHYIETTNEWSQW DEL +SMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
A0A5D3DG14 Retrotransposon protein1.4e-2085.45Show/hide
Query:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
        MTYC+DV++VDEGDSTYATT A+EDIHYI+TTNEWSQWHDEL++SMFTDWQLRNA
Subjt:  MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTAACGACGTGGACGAGGGGGACTCCACGTACGCGACGACGACTGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
ATGGCACGACGAACTAGTCAAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTAACGACGTGGACGAGGGGGACTCCACGTACGCGACGACGACTGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCA
ATGGCACGACGAACTAGTCAAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVNDVDEGDSTYATTTASEDIHYIETTNEWSQWHDELVKSMFTDWQLRNA